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@@ -76,9 +76,11 @@ model_train/*.feather
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model_train/*.db
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model_train/*.sqlite
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model_train/*.log
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cloud_removal_model/
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# VSCode settings
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.vscode/
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# Jupyter checkpoints
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.ipynb_checkpoints/
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reports/
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@@ -1,5 +0,0 @@
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# This directory is a Syncthing folder marker.
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# Do not delete.
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folderID: rs-data
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created: 2026-04-03T11:35:19+07:00
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#!/usr/bin/env python
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# coding: utf-8
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# In[1]:
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get_ipython().run_cell_magic('time', '', '%matplotlib inline\n\nimport importlib\nimport new_import_ODC \n\nimportlib.reload(new_import_ODC)\n\nfrom new_import_ODC import *\n')
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# In[2]:
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get_ipython().run_cell_magic('time', '', '# Cấu hình Daskgateway\ncluster, client = notebook_utils.initialize_dask(use_gateway=True, workers=(1, 10))\n# Khai báo 1 Datacube là dc\ndc = None\n\n# Cấu hình truy cập dịch vụ S3\nconfigure_s3_access(aws_unsigned=False, requester_pays=True, client=client)\n\nclient\n')
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# In[3]:
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## cấu hình thời gian lấy ảnh và tọa độ
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date_range = ("2022-09-01", "2022-10-01")
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longtitude_range = (105.86, 105.94)
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latitude_range = (9.65, 9.69)
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coordinates = (longtitude_range, latitude_range)
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# In[4]:
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## truy vấn ảnh vệ tinh sen2
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data = load_data(None, date_range, longtitude_range, latitude_range)
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notebook_utils.heading(notebook_utils.xarray_object_size(data))
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display(data)
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# In[5]:
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get_ipython().run_cell_magic('time', '', '# Tiến hành loại bỏ các vị trí bị mây ảnh hưởng\nresult = mask_clean(data)\n# progress(result)\n')
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# In[6]:
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# Tiến hành tính toán NDVI
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ds1 = calculate_indices(result, index="NDVI", satellite_mission="s2")
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ndvi = ds1["NDVI"]
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display(ndvi)
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# In[7]:
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## Hiển thị ảnh NDVI chưa điền các giá trị mây (chưa fill nan)
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plt.imshow(ndvi.isel(time=0))
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# In[8]:
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# Thiết lập giá trị trung bình mùa vụ để xử lý các điểm ảnh bị mây dựa vào sự thay đổi theo mùa
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time_split = [
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slice("2022-09-01", "2023-01-01"),
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slice("2023-01-01", "2023-05-01"),
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slice("2023-05-01", "2023-07-01"),
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slice("2023-07-01", "2022-10-01"),
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]
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# Điền mây ở các vị trí mang giá trị nan (fill nan)
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fill_nan_ndvi = fill_nan(ndvi, time_split)
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# In kết quả ảnh NDVI đã điền mây (đã fill nan)
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plt.imshow(fill_nan_ndvi.isel(time=0))
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# In[9]:
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get_ipython().run_cell_magic('time', '', '## tính ndvi theo tháng\naverage_ndvi = fill_nan_ndvi.resample(time="1M").mean().persist()\n# progress(average_ndvi)\n\n# compute average_ndvi\naverage_ndvi = average_ndvi.compute()\n')
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# In[10]:
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#Load dữ liệu ảnh Sentinel 1
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dsvh, dsvv = load_data_sen1(None, date_range, coordinates)
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average_vv = calculate_average(dsvv, time_pattern='1M')
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average_vh = calculate_average(dsvh, time_pattern='1M')
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# In[11]:
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## cấu hình bộ dữ liệu điểm huấn luyện mô hình (train file)
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train_path = "train/ST_training_data_updated_1130points_new.shp" # đường dẫn shp file train
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## load dữ liệu điểm huấn luyện mô hình (train file)
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train = load_train_data(train_path)
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train.head()
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# cấu hình nhãn dữ liệu
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label_mapping = {
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"Lua tom": "0",
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"Lua": "1",
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"CHN": "2",
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"CLN": "3",
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"TS": "4",
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"Song": "5",
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"Dat xay dung": "6",
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"Rung": "7",
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}
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# xây dựng tập dữ liệu (dataset) chứa dữ liệu VH, VV, NDVI
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datasets = get_data_sen1_and_sen2(train, average_ndvi, average_vh, average_vv)
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# chia tập dữ liệu thành các phần theo tỉ lệ 80(80-20)-20 tương ứng với tập train, validate, test
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X_train, X_val, X_test, y_train, y_val, y_test = split_train_data(
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train, label_mapping, datasets
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)
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# In[ ]:
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get_ipython().run_cell_magic('time', '', '# Import XGBoost\nimport xgboost as xgb\nfrom sklearn.metrics import accuracy_score\nimport numpy as np\n\n# Convert to numpy arrays\nX_train_np = np.asarray(X_train, dtype=np.float32)\nX_val_np = np.asarray(X_val, dtype=np.float32)\ny_train_np = np.asarray(y_train, dtype=np.int32)\ny_val_np = np.asarray(y_val, dtype=np.int32)\n\nprint("🚀 Training XGBoost model...")\nprint(f" Train samples: {len(X_train_np)}")\nprint(f" Val samples: {len(X_val_np)}")\nprint(f" Features: {X_train_np.shape[1]}")\nprint(f" Classes: 8\\n")\n\n# XGBoost parameters\nparams = {\n \'objective\': \'multi:softmax\', # Multi-class classification\n \'num_class\': 8, # 8 land use classes\n \'max_depth\': 6, # Maximum tree depth\n \'learning_rate\': 0.1, # Learning rate\n \'n_estimators\': 200, # Number of trees\n \'subsample\': 0.8, # Subsample ratio\n \'colsample_bytree\': 0.8, # Feature sampling ratio\n \'random_state\': 42,\n \'n_jobs\': -1, # Use all CPU cores\n \'eval_metric\': \'mlogloss\' # Multi-class log loss\n}\n\n# Train XGBoost model\nmodel = xgb.XGBClassifier(**params)\n\nmodel.fit(\n X_train_np, y_train_np,\n eval_set=[(X_train_np, y_train_np), (X_val_np, y_val_np)],\n verbose=True\n)\n\n# Validation accuracy\ny_val_pred = model.predict(X_val_np)\nval_accuracy = accuracy_score(y_val_np, y_val_pred)\nprint(f"\\n✅ Training completed!")\nprint(f" Validation Accuracy: {val_accuracy:.4f} ({val_accuracy*100:.2f}%)")\n')
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# In[ ]:
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get_ipython().run_cell_magic('time', '', '# Evaluate on test set\nX_test_np = np.asarray(X_test, dtype=np.float32)\ny_test_np = np.asarray(y_test, dtype=np.int32)\n\nprint("📊 Evaluating XGBoost model on test set...\\n")\n\n# Predictions\ny_pred_test = model.predict(X_test_np)\n\n# Metrics\nfrom sklearn.metrics import accuracy_score, precision_score, recall_score, f1_score, confusion_matrix\n\ntest_accuracy = accuracy_score(y_test_np, y_pred_test)\nprecision = precision_score(y_test_np, y_pred_test, average=\'weighted\', zero_division=0)\nrecall = recall_score(y_test_np, y_pred_test, average=\'weighted\', zero_division=0)\nf1 = f1_score(y_test_np, y_pred_test, average=\'weighted\', zero_division=0)\n\nprint(f"📈 Test Results:")\nprint(f" Accuracy: {test_accuracy:.4f} ({test_accuracy*100:.2f}%)")\nprint(f" Precision: {precision:.4f}")\nprint(f" Recall: {recall:.4f}")\nprint(f" F1-Score: {f1:.4f}\\n")\n\n# Confusion Matrix\nfrom sklearn.metrics import ConfusionMatrixDisplay\nimport matplotlib.pyplot as plt\n\n# Create figure first\nfig, ax = plt.subplots(figsize=(10, 8))\n\nclass_names = list(label_mapping.keys())\ncm = confusion_matrix(y_test_np, y_pred_test)\ndisp = ConfusionMatrixDisplay(confusion_matrix=cm, display_labels=class_names)\ndisp.plot(cmap=\'Blues\', ax=ax)\nplt.xticks(rotation=45, ha=\'right\')\nplt.title(\'XGBoost Confusion Matrix\')\nplt.tight_layout()\nplt.show()\n')
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# In[ ]:
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# Lưu mô hình huấn luyện
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import json
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import joblib
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# Save XGBoost model
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model_path = "model_xgboost.joblib"
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joblib.dump(model, model_path)
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print(f"✅ Model saved to {model_path}")
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# Save model info
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info = {
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"model_type": "XGBoost",
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"num_classes": 8,
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"classes": list(label_mapping.keys()),
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"num_features": X_train_np.shape[1],
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"params": params,
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"accuracy": float(test_accuracy),
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"precision": float(precision),
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"recall": float(recall),
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"f1_score": float(f1),
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}
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with open("model_xgboost_info.json", "w") as f:
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json.dump(info, f, indent=2)
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print(f"✅ Model info saved to model_xgboost_info.json")
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# In[15]:
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# đóng client, cluster
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# client.close()
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# cluster.close()
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+113
-115
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#!/usr/bin/env python
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# coding: utf-8
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# In[6]:
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get_ipython().run_cell_magic('time', '', '%matplotlib inline\n\n# Import Microsoft Planetary Computer libraries\nimport planetary_computer\nfrom pystac_client import Client\nfrom odc.stac import load as stac_load\n\n# Standard imports\nimport xarray as xr\nimport numpy as np\nimport matplotlib.pyplot as plt\nfrom sklearn.model_selection import train_test_split\nfrom sklearn.metrics import accuracy_score, classification_report, confusion_matrix, ConfusionMatrixDisplay\nimport geopandas as gpd\n\n# XGBoost for GPU training\nimport xgboost as xgb\n\nfrom xgboost import XGBClassifier\n\nprint(f" XGBoost version: {xgb.__version__}")\n\nprint("✅ All modules loaded successfully")\n')
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# In[7]:
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get_ipython().run_cell_magic('time', '', '# Kết nối tới Microsoft Planetary Computer STAC\nfrom pystac_client import Client\n\n# KHÔNG dùng modifier ở catalog level để tránh items bị convert thành dict\ncatalog = Client.open(\n "https://planetarycomputer.microsoft.com/api/stac/v1"\n)\nprint("✅ Connected to Microsoft Planetary Computer")\n\nprint("\\n" + "="*70)\n')
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# In[8]:
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get_ipython().run_cell_magic('time', '', '# 🌍 Định nghĩa khu vực và thời gian\nprint("="*70)\nprint("CONFIGURATION")\nprint("="*70)\n\n# Khu vực quan tâm (Vietnam - Mekong Delta) - GIẢM DIỆN TÍCH ~40%\nbbox = [105.6, 9.3, 106.2, 9.8] # [min_lon, min_lat, max_lon, max_lat]\n\n# GIẢM THỜI GIAN xuống 3 tháng để giảm kích thước dữ liệu cho PC\ntime_range = "2023-03-01/2023-05-31" # 3 tháng (mùa khô)\n\nprint(f"\\n📍 Area of Interest:")\nprint(f" Longitude: {bbox[0]} to {bbox[2]}")\nprint(f" Latitude: {bbox[1]} to {bbox[3]}")\nprint(f"\\n📅 Time Range: {time_range}")\nprint(f" ⚠️ Optimized for personal computer (3 months, reduced area)")\nprint(f"\\n🗺️ CRS: EPSG:32648")\nprint(f" Resolution: 20m (reduced from 10m for smaller data size)")\n\nprint("="*70)\n')
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# In[9]:
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get_ipython().run_cell_magic('time', '', '# 📡 LOAD SENTINEL-2 FROM MICROSOFT PLANETARY COMPUTER\nprint("="*70)\nprint("LOADING SENTINEL-2 L2A")\nprint("="*70)\n\nprint("\\n🔍 Searching for Sentinel-2 scenes...")\nquery_s2 = catalog.search(\n collections=["sentinel-2-l2a"],\n bbox=bbox,\n datetime=time_range,\n query={"eo:cloud_cover": {"lt": 30}} # Cloud cover < 30% (giảm từ 50%)\n)\n\nitems_s2 = list(query_s2.item_collection())\nprint(f"✅ Found {len(items_s2)} Sentinel-2 scenes")\n\n# GIỚI HẠN SỐ LƯỢNG SCENES cho PC cá nhân\nmax_scenes = 12 # Giảm xuống 12 scenes để tối ưu cho PC\nif len(items_s2) > max_scenes:\n print(f"⚠️ Limiting to {max_scenes} scenes for personal computer")\n # Chọn scenes đều đặn trong khoảng thời gian\n step = len(items_s2) // max_scenes\n items_s2 = items_s2[::step][:max_scenes]\n print(f" Selected {len(items_s2)} scenes evenly distributed")\n\nif len(items_s2) > 0:\n # Show first few scenes\n print(f"\\n📋 Sample scenes:")\n for i, item in enumerate(items_s2[:5]):\n date = item.datetime.strftime("%Y-%m-%d")\n cloud = item.properties.get("eo:cloud_cover", "N/A")\n print(f" [{i+1}] {date} - Cloud: {cloud}%")\n \n # Re-sign items to ensure fresh URLs (keep as pystac objects)\n print(f"\\n🔑 Signing STAC items...")\n items_s2 = [planetary_computer.sign(item) for item in items_s2]\n \n # Load Sentinel-2 data (without Dask chunks)\n print(f"\\n⏳ Loading Sentinel-2 data...")\n ds_s2 = stac_load(\n items_s2,\n bands=["B04", "B08", "SCL"], # Red (B04), NIR (B08), Scene Classification (SCL)\n crs="EPSG:32648",\n resolution=20, # 20m resolution (4x smaller data than 10m)\n bbox=bbox,\n patch_url=planetary_computer.sign, # Re-sign URLs during loading\n fail_on_error=False, # Skip problematic tiles instead of crashing\n )\n \n # Rename bands to simpler names\n ds_s2 = ds_s2.rename({"B04": "red", "B08": "nir", "SCL": "scl"})\n \n print(f"\\n✅ Sentinel-2 loaded!")\n print(f" Shape: {dict(ds_s2.dims)}")\n print(f" Variables: {list(ds_s2.data_vars)}")\n display(ds_s2)\nelse:\n print(f"❌ No Sentinel-2 scenes found")\n\n ds_s2 = Noneprint("="*70)\n')
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# In[10]:
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|
||||
get_ipython().run_cell_magic('time', '', '# 📡 LOAD SENTINEL-1 FROM MICROSOFT PLANETARY COMPUTER\nprint("="*70)\nprint("LOADING SENTINEL-1 RTC")\nprint("="*70)\n\nprint("\\n🔍 Searching for Sentinel-1 scenes...")\nquery_s1 = catalog.search(\n collections=["sentinel-1-rtc"],\n bbox=bbox,\n datetime=time_range,\n)\n\nitems_s1 = list(query_s1.item_collection())\nprint(f"✅ Found {len(items_s1)} Sentinel-1 scenes")\n\n# GIỚI HẠN SỐ LƯỢNG SCENES cho PC cá nhân\nmax_scenes = 12 # Giảm xuống 12 scenes để tối ưu cho PC\nif len(items_s1) > max_scenes:\n print(f"⚠️ Limiting to {max_scenes} scenes for personal computer")\n # Chọn scenes đều đặn trong khoảng thời gian\n step = len(items_s1) // max_scenes\n items_s1 = items_s1[::step][:max_scenes]\n print(f" Selected {len(items_s1)} scenes evenly distributed")\n\nif len(items_s1) > 0:\n # Show first few scenes\n print(f"\\n📋 Sample scenes:")\n for i, item in enumerate(items_s1[:5]):\n date = item.datetime.strftime("%Y-%m-%d")\n orbit = item.properties.get("sat:orbit_state", "N/A")\n print(f" [{i+1}] {date} - Orbit: {orbit}")\n \n # Re-sign items to ensure fresh URLs (keep as pystac objects)\n print(f"\\n🔑 Signing STAC items...")\n items_s1 = [planetary_computer.sign(item) for item in items_s1]\n \n # Load Sentinel-1 data (without Dask chunks)\n print(f"\\n⏳ Loading Sentinel-1 data...")\n ds_s1 = stac_load(\n items_s1,\n bands=["vv", "vh"], # VV and VH polarizations\n crs="EPSG:32648",\n resolution=20, # 20m resolution (4x smaller data than 10m)\n bbox=bbox,\n patch_url=planetary_computer.sign, # Re-sign URLs during loading\n fail_on_error=False, # Skip problematic tiles instead of crashing\n )\n \n # Convert to dB (Microsoft S1 is in linear power)\n print(f"\\n🔄 Converting to dB...")\n ds_s1[\'vv_db\'] = 10 * np.log10(ds_s1[\'vv\'].where(ds_s1[\'vv\'] > 0))\n ds_s1[\'vh_db\'] = 10 * np.log10(ds_s1[\'vh\'].where(ds_s1[\'vh\'] > 0))\n \n print(f"\\n✅ Sentinel-1 loaded!")\n print(f" Shape: {dict(ds_s1.dims)}")\n print(f" Variables: {list(ds_s1.data_vars)}")\n display(ds_s1)\nelse:\n print(f"❌ No Sentinel-1 scenes found")\n\n ds_s1 = Noneprint("="*70)\n')
|
||||
|
||||
|
||||
# In[11]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', '# 🌿 CALCULATE NDVI AND PROCESS DATA\nprint("="*70)\nprint("DATA PROCESSING")\nprint("="*70)\n\nif ds_s2 is not None:\n print("\\n[1] Calculating NDVI...")\n # NDVI = (NIR - Red) / (NIR + Red)\n ndvi = (ds_s2[\'nir\'] - ds_s2[\'red\']) / (ds_s2[\'nir\'] + ds_s2[\'red\'] + 1e-8)\n \n print(f"✅ NDVI calculated")\n print(f" Shape: {ndvi.shape}")\n print(f" Time steps: {len(ndvi.time)}")\n \n # Cloud masking using SCL band\n print(f"\\n[2] Applying cloud mask...")\n # SCL values: 1=defective, 3=cloud shadow, 8=cloud medium, 9=cloud high, 10=cirrus\n cloud_mask = ds_s2[\'scl\'].isin([1, 3, 8, 9, 10])\n ndvi_masked = ndvi.where(~cloud_mask)\n \n print(f"✅ Cloud mask applied")\n \n # Temporal aggregation (mean over time)\n print(f"\\n[3] Computing mean NDVI across time...")\n ndvi_mean = ndvi_masked.mean(dim=\'time\')\n \n # Data already in memory, no need to compute() again\n print(f"✅ Mean NDVI computed")\n print(f" Shape: {ndvi_mean.shape}")\n \nelse:\n print("❌ No Sentinel-2 data to process")\n ndvi_mean = None\n\nprint("="*70)\n')
|
||||
|
||||
|
||||
# In[ ]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', '# 🎯 EXTRACT TRAINING DATA FEATURES\nprint("="*70)\nprint("FEATURE EXTRACTION")\nprint("="*70)\n\n# Check if required data is available\nif \'ndvi_mean\' not in globals() or \'ds_s1\' not in globals():\n print("❌ Error: Please run Cell 6 (DATA PROCESSING) first!")\n print(" Required variables: ndvi_mean, ds_s1")\n raise RuntimeError("Missing required data. Run cells in order: Cell 4 → Cell 5 → Cell 6 → Cell 7")\n\n# Load training shapefile\nimport geopandas as gpd\n\ntrain_path = \'train/ST_training data_updated_1130points_new.shp\'\nprint(f"\\n[1] Loading training data from: {train_path}")\ntrain_gdf = gpd.read_file(train_path)\n\n# Ensure CRS matches\nif train_gdf.crs != \'EPSG:32648\':\n print(f" Reprojecting from {train_gdf.crs} to EPSG:32648...")\n train_gdf = train_gdf.to_crs(\'EPSG:32648\')\n\nprint(f"✅ Loaded {len(train_gdf)} training points")\nprint(f" Available columns: {list(train_gdf.columns)}")\n\n# Auto-detect label column (look for common names)\nlabel_column = None\nfor col in [\'HT_code\', \'Ma_LU\', \'LU2022\', \'class\', \'Class\', \'CLASS\', \'label\', \'Label\', \'LABEL\', \'LU_CODE\', \'LU_code\']:\n if col in train_gdf.columns:\n label_column = col\n break\n\nif label_column is None:\n print(f"❌ Cannot find label column. Available columns: {list(train_gdf.columns)}")\n print(f" Please check your shapefile and update the code.")\nelse:\n print(f" Using label column: \'{label_column}\'")\n print(f" Classes: {sorted(train_gdf[label_column].unique())}")\n \n # Extract features at each training point\n print(f"\\n[2] Extracting features at training points...")\n \n features = []\n labels = []\n skipped = 0\n \n for idx, row in train_gdf.iterrows():\n point = row.geometrychro\n x_coord = point.x\n y_coord = point.y\n label = row[label_column]\n \n # Extract NDVI at this location\n if ndvi_mean is not None and ds_s1 is not None:\n try:\n ndvi_val = ndvi_mean.sel(x=x_coord, y=y_coord, method=\'nearest\').values\n \n # Extract Sentinel-1 VH/VV at this location (mean across time)\n # Data already in memory, no need to compute()\n vh_val = ds_s1[\'vh_db\'].sel(x=x_coord, y=y_coord, method=\'nearest\').mean(dim=\'time\').values\n vv_val = ds_s1[\'vv_db\'].sel(x=x_coord, y=y_coord, method=\'nearest\').mean(dim=\'time\').values\n \n # Create feature vector: [NDVI, VH_dB, VV_dB]\n feature_vec = [ndvi_val, vh_val, vv_val]\n \n # Only add if all features are valid (not NaN)\n if not np.isnan(feature_vec).any():\n features.append(feature_vec)\n labels.append(label)\n else:\n skipped += 1\n except Exception as e:\n # Skip points outside the data extent\n skipped += 1\n continue\n \n features = np.array(features)\n labels = np.array(labels)\n \n print(f"✅ Extracted features for {len(features)} valid points")\n print(f" Skipped {skipped} points (outside extent or NaN values)")\n print(f" Feature shape: {features.shape}")\n print(f" Feature names: [\'NDVI_mean\', \'VH_dB_mean\', \'VV_dB_mean\']")\n print(f"\\n Class distribution:")\n unique, counts = np.unique(labels, return_counts=True)\n for cls, cnt in zip(unique, counts):\n print(f" Class {cls}: {cnt} samples ({cnt/len(labels)*100:.1f}%)")\n\nprint("="*70)\n')
|
||||
|
||||
|
||||
# In[21]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', '# 🤖 TRAIN XGBOOST MODEL ON GPU (RTX 4060)\nprint("="*70)\nprint("MODEL TRAINING - GPU ACCELERATED")\nprint("="*70)\n\nfrom xgboost import XGBClassifier\nfrom sklearn.model_selection import train_test_split\nfrom sklearn.preprocessing import LabelEncoder\nfrom sklearn.metrics import classification_report, confusion_matrix, ConfusionMatrixDisplay\nimport matplotlib.pyplot as plt\n\n# Encode labels to ensure they are 0, 1, 2, ... n-1\nprint("\\n[1] Encoding labels...")\nlabel_encoder = LabelEncoder()\nlabels_encoded = label_encoder.fit_transform(labels)\nprint(f"✅ Original classes: {label_encoder.classes_}")\nprint(f" Encoded as: {np.unique(labels_encoded)}")\n\n# Split data\nprint("\\n[2] Splitting data (80% train, 20% test)...")\nX_train, X_test, y_train, y_test = train_test_split(\n features, labels_encoded, test_size=0.2, random_state=42, stratify=labels_encoded\n)\nprint(f"✅ Training samples: {len(X_train)}")\nprint(f" Testing samples: {len(X_test)}")\n\n# Train XGBoost on GPU\nprint("\\n[3] Training XGBoost classifier on RTX 4060 GPU...")\nprint(" GPU Settings: device=\'cuda:0\'")\n\nxgb_model = XGBClassifier(\n n_estimators=100,\n max_depth=20,\n learning_rate=0.1,\n device=\'cuda:0\', # Use GPU (updated from deprecated gpu_id)\n tree_method=\'hist\', # Use hist with device for GPU training\n random_state=42,\n eval_metric=\'mlogloss\', # Multi-class log loss\n verbosity=1 # Show GPU training progress\n)\n\nxgb_model.fit(X_train, y_train)\nprint(f"✅ Model trained on GPU")\n\n# Evaluate\nprint("\\n[4] Evaluating model...")\ntrain_score = xgb_model.score(X_train, y_train)\ntest_score = xgb_model.score(X_test, y_test)\nprint(f"✅ Training accuracy: {train_score:.4f}")\nprint(f" Testing accuracy: {test_score:.4f}")\n\n# Classification report\nprint("\\n[5] Classification Report:")\ny_pred = xgb_model.predict(X_test)\nprint(classification_report(y_test, y_pred, target_names=[str(c) for c in label_encoder.classes_]))\n\n# Confusion matrix\nprint("\\n[6] Confusion Matrix:")\nfig, ax = plt.subplots(figsize=(10, 8))\ncm = confusion_matrix(y_test, y_pred)\ndisp = ConfusionMatrixDisplay(confusion_matrix=cm, display_labels=label_encoder.classes_)\ndisp.plot(ax=ax, cmap=\'Blues\', values_format=\'d\')\nplt.title(\'Confusion Matrix - XGBoost GPU Model (RTX 4060)\')\nplt.tight_layout()\nplt.show()\n\nprint("="*70)\n')
|
||||
|
||||
|
||||
# In[23]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', '# 💾 SAVE MODEL AND CLEANUP\nprint("="*70)\nprint("SAVING MODEL & CLEANUP")\nprint("="*70)\n\nimport joblib\nfrom datetime import datetime\n\n# Save model and label encoder\nmodel_filename = f"model_train/model_xgboost_gpu_{datetime.now().strftime(\'%Y%m%d_%H%M%S\')}.joblib"\nprint(f"\\n[1] Saving model to: {model_filename}")\njoblib.dump({\'model\': xgb_model, \'label_encoder\': label_encoder}, model_filename)\nprint(f"✅ Model and label encoder saved")\n\n# Save model info\ninfo = {\n "timestamp": datetime.now().isoformat(),\n "data_source": "Microsoft Planetary Computer STAC",\n "collections": ["sentinel-2-l2a", "sentinel-1-rtc"],\n "features": ["NDVI_mean", "VH_dB_mean", "VV_dB_mean"],\n "training_samples": len(X_train),\n "testing_samples": len(X_test),\n "train_accuracy": float(train_score),\n "test_accuracy": float(test_score),\n "model_type": "XGBClassifier",\n "device": "cuda:0",\n "gpu_device": "RTX 4060",\n "tree_method": "hist",\n "n_estimators": 100,\n "max_depth": 20,\n "learning_rate": 0.1\n}\n\nimport json\ninfo_filename = model_filename.replace(\'.joblib\', \'_info.json\')\nwith open(info_filename, \'w\') as f:\n json.dump(info, f, indent=2)\nprint(f"✅ Model info saved to: {info_filename}")\n\n# No cleanup needed (Dask removed)\nprint("\\n[2] Cleanup complete")\n\nprint("="*70)\n\nprint("\\n" + "="*70)\n\nprint("🎉 TRAINING COMPLETE!")\n')
|
||||
|
||||
File diff suppressed because one or more lines are too long
@@ -0,0 +1,191 @@
|
||||
#!/usr/bin/env python
|
||||
# coding: utf-8
|
||||
|
||||
# In[1]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', '%matplotlib inline\n\nimport importlib\nimport new_import_ODC \n\nimportlib.reload(new_import_ODC)\n\nfrom new_import_ODC import *\n')
|
||||
|
||||
|
||||
# In[2]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', '# Dask gateway\ncluster, client = notebook_utils.initialize_dask(use_gateway=True, workers=(1,4))\ndc = datacube.Datacube()\n\n# Configure s3 access\nconfigure_s3_access(aws_unsigned=False, requester_pays=True, client=client)\n\nclient\n')
|
||||
|
||||
|
||||
# In[3]:
|
||||
|
||||
|
||||
## cấu hình thời gian lấy ảnh và tọa độ
|
||||
date_range = ('2022-09-01', '2023-10-01')
|
||||
longtitude_range = (105.86575, 105.94120)
|
||||
latitude_range = (9.65070, 9.69850)
|
||||
|
||||
|
||||
# In[4]:
|
||||
|
||||
|
||||
## truy vấn ảnh vệ tinh sen2
|
||||
data = load_data(dc, date_range, longtitude_range, latitude_range)
|
||||
notebook_utils.heading(notebook_utils.xarray_object_size(data))
|
||||
display(data)
|
||||
|
||||
|
||||
# In[5]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', '# Tiến hành loại bỏ các vị trí bị mây ảnh hưởng\nresult = mask_clean(data)\nprogress(result)\n')
|
||||
|
||||
|
||||
# In[6]:
|
||||
|
||||
|
||||
# Tiến hành tính toán NDVI
|
||||
ds1 = calculate_indices(result, index='NDVI', satellite_mission='s2')
|
||||
ndvi = ds1["NDVI"]
|
||||
display(ndvi)
|
||||
|
||||
|
||||
# In[7]:
|
||||
|
||||
|
||||
## ảnh NDVI chưa điền mây (fill nan)
|
||||
plt.imshow(ndvi.isel(time=50))
|
||||
|
||||
|
||||
# In[8]:
|
||||
|
||||
|
||||
# đặt thời gian các mùa
|
||||
time_split = [slice('2022-09-01', '2023-01-01'),
|
||||
slice('2023-01-01', '2023-05-01'),
|
||||
slice('2023-05-01', '2023-07-01'),
|
||||
slice('2023-07-01', '2023-10-01')]
|
||||
|
||||
# Điền mây ở các vị trí mang giá trị nan (fill nan)
|
||||
fill_nan_ndvi = fill_nan(ndvi, time_split)
|
||||
|
||||
# In kết quả ảnh ndvi đã điền mây (đã fill nan)
|
||||
plt.imshow(fill_nan_ndvi.isel(time=50))
|
||||
|
||||
|
||||
# In[9]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', "## tính ndvi theo tháng\naverage_ndvi = fill_nan_ndvi.resample(time='1M').mean().persist()\nprogress(average_ndvi)\n")
|
||||
|
||||
|
||||
# In[10]:
|
||||
|
||||
|
||||
# compute average_ndvi
|
||||
average_ndvi = average_ndvi.compute()
|
||||
|
||||
|
||||
# In[11]:
|
||||
|
||||
|
||||
# load dữ liệu sen1
|
||||
coordinates = (longtitude_range, latitude_range)
|
||||
dsvh, dsvv = load_data_sen1(dc, date_range, coordinates)
|
||||
average_vv = calculate_average(dsvv, time_pattern='1M')
|
||||
average_vh = calculate_average(dsvh, time_pattern='1M')
|
||||
|
||||
|
||||
# In[12]:
|
||||
|
||||
|
||||
# load model RF
|
||||
loaded_model = joblib.load(os.path.join("model_train", "model_odc.joblib"))
|
||||
|
||||
# dự đoán
|
||||
data_array = predict(loaded_model, data.rio.crs, average_ndvi, average_vh, average_vv)
|
||||
|
||||
|
||||
# In[13]:
|
||||
|
||||
|
||||
# cấu hình màu cho các loại đất
|
||||
colors = [
|
||||
"#abcee9",
|
||||
"#ffef44",
|
||||
"#c4ff9e",
|
||||
"#ffd6a8",
|
||||
"#93ddda",
|
||||
"#1aeef7",
|
||||
"#ffa7f2",
|
||||
"#33ee33"
|
||||
]
|
||||
labels = [
|
||||
"Lúa tôm",
|
||||
"Lúa",
|
||||
"CHN",
|
||||
"CLN",
|
||||
"TS",
|
||||
"Sông",
|
||||
"Đất xây dựng",
|
||||
"Rừng"
|
||||
]
|
||||
# hiển thị phân loại sử dụng đất
|
||||
cmap = ListedColormap(colors)
|
||||
img = data_array.plot(cmap=cmap, add_colorbar=False)
|
||||
cbar = plt.colorbar(img)
|
||||
cbar.ax.set_yticklabels(labels)
|
||||
plt.title("Phân loại sử dụng đất")
|
||||
plt.axis('off')
|
||||
plt.show()
|
||||
|
||||
|
||||
# In[14]:
|
||||
|
||||
|
||||
## cấu hình shapefile ranh giới thuận hòa và vh vv file
|
||||
thuanhoa_path = "ThuanHoa/region/ST_ThuanHoa_Boundaryofficially.shp"
|
||||
|
||||
# cắt theo ranh giới xã thuận hòa
|
||||
region_result = cut_according_shp(thuanhoa_path, average_ndvi, data_array)
|
||||
|
||||
|
||||
# In[15]:
|
||||
|
||||
|
||||
# hiển thị kết quả phân loại sử dụng đất
|
||||
colorval = list(range(len(colors)))
|
||||
options = {
|
||||
'title': 'Phân loại sử dụng đất',
|
||||
'cmap': colors,
|
||||
'clim': (0, 8),
|
||||
'aspect': 'equal',
|
||||
'colorbar_opts': {
|
||||
'major_label_overrides': dict(zip(colorval, labels)),
|
||||
'major_label_text_align': 'left',
|
||||
'ticker': FixedTicker(ticks=colorval),
|
||||
},
|
||||
}
|
||||
|
||||
region_result.hvplot(
|
||||
rasterize = True, # Use Datashader, particularly useful for dask arrays
|
||||
aggregator = reductions.mode(), # Datashader selects mode value, requires 'hv.Image'
|
||||
).options(opts.Image(**options))
|
||||
|
||||
|
||||
# In[16]:
|
||||
|
||||
|
||||
# Lưu lại kết quả
|
||||
region_result.rio.to_raster("KetQuaPhanLoaiDatODC.tif")
|
||||
|
||||
|
||||
# In[17]:
|
||||
|
||||
|
||||
# đóng client, cluster
|
||||
client.close()
|
||||
cluster.close()
|
||||
|
||||
|
||||
# In[ ]:
|
||||
|
||||
|
||||
|
||||
|
||||
@@ -0,0 +1,117 @@
|
||||
#!/usr/bin/env python
|
||||
# coding: utf-8
|
||||
|
||||
# In[1]:
|
||||
|
||||
|
||||
# Khai báo các thư viện cần thiết
|
||||
from new_import_ODC import *
|
||||
|
||||
# Khai báo đường dẫn đến kết quả phân loại và dữ liệu của địa phương
|
||||
KD_path = "ThuanHoa/KhoanhDat/ThuanHoa_TKDD2022.shp"
|
||||
KetQuaPhanLoaiDat = "KetQuaPhanLoaiDatODC.tif"
|
||||
|
||||
|
||||
# In[2]:
|
||||
|
||||
|
||||
# khai báo các loại đất từ dữ liệu kiểm kê ứng với các hiện trạng được phân loại từ viễn thám
|
||||
CODE_MAP = {
|
||||
"BHK": 2,
|
||||
"CLN": 3,
|
||||
"DGD": 6,
|
||||
"DGT": 6,
|
||||
"DNL": 6,
|
||||
"DRA": 6,
|
||||
"DSH": 6,
|
||||
"DTL": 5,
|
||||
"DTS": 6,
|
||||
"DYT": 6,
|
||||
"LUC": 1,
|
||||
"NKH": 3,
|
||||
"NTD": 6,
|
||||
"NTS": 4,
|
||||
"ONT": 6,
|
||||
"SKC": 6,
|
||||
"SKX": 6,
|
||||
"SON": 5,
|
||||
"TMD": 6,
|
||||
"TON": 6,
|
||||
"TSC": 6,
|
||||
}
|
||||
|
||||
# Khai báo các nhãn phân loại đất ứng với 3 loại đất chính
|
||||
HT_MAP = {
|
||||
"NN": {"name": "Đất Nông Nghiệp", "data": [1, 2, 3, 4]},
|
||||
"PNN": {"name": "Đất Phi Nông Nghiệp", "data": [6]},
|
||||
"TQ": {"name": "Đất Thổ Quả", "data": [15]},
|
||||
}
|
||||
|
||||
|
||||
# In[3]:
|
||||
|
||||
|
||||
# Tiến hành chồng lắp
|
||||
result = compare(KD_path, KetQuaPhanLoaiDat, CODE_MAP, HT_MAP)
|
||||
|
||||
|
||||
# In[4]:
|
||||
|
||||
|
||||
# cấu hình màu cho các loại sử dụng đất
|
||||
colors = [
|
||||
"#abcee9",
|
||||
"#ffffc0",
|
||||
"#c4ff9e",
|
||||
"#ffd6a8",
|
||||
"#93ddda",
|
||||
"#1aeef7",
|
||||
"#ffa7f2",
|
||||
"#33ee33",
|
||||
]
|
||||
labels = ["Lúa tôm", "Lúa", "CHN", "CLN", "TS", "Sông", "Đất xây dựng", "Rừng"]
|
||||
|
||||
|
||||
# In[5]:
|
||||
|
||||
|
||||
# Lưu kết quả
|
||||
save_result(result, HT_MAP)
|
||||
|
||||
|
||||
# In[6]:
|
||||
|
||||
|
||||
# hiển thị kết quả
|
||||
xx = []
|
||||
|
||||
for k, v in result.items():
|
||||
rs = merge_arrays(v, nodata=np.nan)
|
||||
xx.append(rs.squeeze(drop=True))
|
||||
xx = xr.concat(xx, pd.Index([HT_MAP[x]["name"] for x in HT_MAP], name="name"))
|
||||
|
||||
colorval = list(range(len(colors)))
|
||||
options = {
|
||||
"cmap": colors,
|
||||
"clim": (0, 8),
|
||||
"aspect": "equal",
|
||||
"height": 400,
|
||||
"colorbar_opts": {
|
||||
"major_label_overrides": dict(zip(colorval, labels)),
|
||||
"major_label_text_align": "left",
|
||||
"ticker": FixedTicker(ticks=colorval),
|
||||
},
|
||||
}
|
||||
|
||||
xx.hvplot(
|
||||
groupby="name",
|
||||
rasterize=True, # Use Datashader, particularly useful for dask arrays
|
||||
aggregator=reductions.mode(), # Datashader selects mode value, requires 'hv.Image'
|
||||
).options(opts.Image(**options))
|
||||
|
||||
|
||||
# In[ ]:
|
||||
|
||||
|
||||
|
||||
|
||||
File diff suppressed because one or more lines are too long
@@ -0,0 +1,18 @@
|
||||
import joblib
|
||||
import numpy as np
|
||||
|
||||
cache_file = "dataset_cache/training_data_2d.joblib"
|
||||
data = joblib.load(cache_file)
|
||||
X = np.array(data['X'])
|
||||
y = np.array(data['y'])
|
||||
|
||||
print("X shape:", X.shape)
|
||||
print("X mean:", np.mean(X))
|
||||
print("X std:", np.std(X))
|
||||
print("X min:", np.min(X))
|
||||
print("X max:", np.max(X))
|
||||
print("Any NaN:", np.isnan(X).any())
|
||||
|
||||
for i in range(6):
|
||||
print(f"Channel {i} mean: {np.mean(X[:, i, :, :]):.4f}, min: {np.min(X[:, i, :, :]):.4f}, max: {np.max(X[:, i, :, :]):.4f}")
|
||||
|
||||
@@ -0,0 +1,10 @@
|
||||
import joblib
|
||||
import geopandas as gpd
|
||||
from shapely.geometry import Point
|
||||
|
||||
data = joblib.load('dataset_cache/training_data_2d.joblib')
|
||||
X, y = data['X'], data['y']
|
||||
print(f"X shape: {X.shape}, y shape: {y.shape}")
|
||||
|
||||
gdf = gpd.read_file("train/ST_training_data_updated_1130points_new.shp")
|
||||
print("Total points:", len(gdf))
|
||||
@@ -0,0 +1,5 @@
|
||||
import xarray as xr
|
||||
import rasterio
|
||||
|
||||
print(f"xarray version: {xr.__version__}")
|
||||
print(f"rasterio version: {rasterio.__version__}")
|
||||
@@ -0,0 +1,7 @@
|
||||
import joblib
|
||||
import numpy as np
|
||||
|
||||
data = joblib.load('dataset_cache/training_data.joblib')
|
||||
X, y = data['X'], data['y']
|
||||
print(f"X shape: {X.shape}")
|
||||
print(f"y shape: {y.shape}")
|
||||
@@ -0,0 +1,8 @@
|
||||
import joblib
|
||||
import numpy as np
|
||||
cache_file = "dataset_cache/training_data_2d.joblib"
|
||||
data = joblib.load(cache_file)
|
||||
X = np.array(data['X'])
|
||||
b2 = X[:, 0, :, :]
|
||||
print("Zeros in B2:", np.sum(b2 == 0) / b2.size)
|
||||
print("X shape:", X.shape)
|
||||
@@ -0,0 +1,10 @@
|
||||
{
|
||||
"cells": [],
|
||||
"metadata": {
|
||||
"language_info": {
|
||||
"name": "python"
|
||||
}
|
||||
},
|
||||
"nbformat": 4,
|
||||
"nbformat_minor": 5
|
||||
}
|
||||
@@ -0,0 +1,25 @@
|
||||
import glob, json
|
||||
|
||||
changed_files = []
|
||||
for file_path in glob.glob('*.ipynb'):
|
||||
with open(file_path, 'r', encoding='utf-8') as f:
|
||||
nb = json.load(f)
|
||||
|
||||
changed = False
|
||||
for cell in nb.get('cells', []):
|
||||
if cell.get('cell_type') == 'code':
|
||||
source = cell.get('source', [])
|
||||
for i, line in enumerate(source):
|
||||
if 'time=50' in line:
|
||||
source[i] = line.replace('time=50', 'time=0')
|
||||
changed = True
|
||||
if 'load_data_sen1(dc,' in line:
|
||||
source[i] = line.replace('load_data_sen1(dc,', 'load_data_sen1(None,')
|
||||
changed = True
|
||||
|
||||
if changed:
|
||||
with open(file_path, 'w', encoding='utf-8') as f:
|
||||
json.dump(nb, f, indent=1)
|
||||
changed_files.append(file_path)
|
||||
|
||||
print('Fixed issues in:', changed_files)
|
||||
@@ -0,0 +1,19 @@
|
||||
import joblib
|
||||
import geopandas as gpd
|
||||
import numpy as np
|
||||
|
||||
cache_file = "dataset_cache/training_data_2d.joblib"
|
||||
data = joblib.load(cache_file)
|
||||
X = data['X']
|
||||
print("X shape:", len(X))
|
||||
|
||||
gdf = gpd.read_file("train/ST_training_data_updated_1130points_new.shp")
|
||||
gdf = gdf.to_crs("EPSG:32648")
|
||||
print("gdf length:", len(gdf))
|
||||
|
||||
if len(X) == len(gdf):
|
||||
y = [(row['HT_code'] - 1) for idx, row in gdf.iterrows()]
|
||||
joblib.dump({'X': X, 'y': y}, cache_file)
|
||||
print("Fixed y in cache! Saved.")
|
||||
else:
|
||||
print("Lengths do not match, cannot fix automatically.")
|
||||
@@ -0,0 +1,20 @@
|
||||
import json
|
||||
|
||||
def fix_import(file_path):
|
||||
with open(file_path, 'r', encoding='utf-8') as f:
|
||||
nb = json.load(f)
|
||||
changed = False
|
||||
for cell in nb.get('cells', []):
|
||||
if cell.get('cell_type') == 'code':
|
||||
source = cell.get('source', [])
|
||||
if isinstance(source, list):
|
||||
for i, line in enumerate(source):
|
||||
if "from new_import import *" in line:
|
||||
source[i] = line.replace("from new_import import *", "from new_import_ODC import *")
|
||||
changed = True
|
||||
if changed:
|
||||
with open(file_path, 'w', encoding='utf-8') as f:
|
||||
json.dump(nb, f, indent=1)
|
||||
print(f"Fixed {file_path}")
|
||||
|
||||
fix_import('new_train.ipynb')
|
||||
@@ -0,0 +1,20 @@
|
||||
import re
|
||||
|
||||
filepath = "01.train_ODC.py"
|
||||
with open(filepath, 'r', encoding='utf-8') as f:
|
||||
content = f.read()
|
||||
|
||||
# Find the run_cell_magic line
|
||||
pattern = re.compile(r"get_ipython\(\)\.run_cell_magic\('time', '', '(# 🤖 LAND USE CLASSIFICATION MODEL TRAINING.*?)(?=\n')\n'", re.DOTALL)
|
||||
|
||||
def repl(match):
|
||||
# Get the inner string and escape all actual newlines with \n
|
||||
inner = match.group(1)
|
||||
inner = inner.replace('\n', '\\n')
|
||||
return f"get_ipython().run_cell_magic('time', '', '{inner}')"
|
||||
|
||||
content = pattern.sub(repl, content)
|
||||
|
||||
with open(filepath, 'w', encoding='utf-8') as f:
|
||||
f.write(content)
|
||||
print("Fixed 01.train_ODC.py syntax")
|
||||
@@ -0,0 +1,22 @@
|
||||
import json
|
||||
|
||||
def fix_filename(file_path):
|
||||
with open(file_path, 'r', encoding='utf-8') as f:
|
||||
nb = json.load(f)
|
||||
changed = False
|
||||
for cell in nb.get('cells', []):
|
||||
if cell.get('cell_type') == 'code':
|
||||
source = cell.get('source', [])
|
||||
if isinstance(source, list):
|
||||
for i, line in enumerate(source):
|
||||
if "ST_training data_updated_1130points.shp" in line:
|
||||
source[i] = line.replace("ST_training data_updated_1130points.shp", "ST_training_data_updated_1130points.shp")
|
||||
changed = True
|
||||
if changed:
|
||||
with open(file_path, 'w', encoding='utf-8') as f:
|
||||
json.dump(nb, f, indent=1)
|
||||
print(f"Fixed typo in {file_path}")
|
||||
|
||||
import glob
|
||||
for nb in glob.glob("*.ipynb"):
|
||||
fix_filename(nb)
|
||||
@@ -0,0 +1,58 @@
|
||||
import nbformat as nbf
|
||||
|
||||
nb = nbf.v4.new_notebook()
|
||||
|
||||
text_1 = """# Script Tải Dữ liệu Vệ tinh (Cache) qua Google Colab
|
||||
Mục đích của Notebook này là mượn sức mạnh đường truyền và RAM của Google Colab để tải 270 ảnh Sentinel-2 & Sentinel-1 từ Microsoft Planetary Computer. Sau khi xử lý nội suy, nó sẽ sinh ra một file cache `.joblib` duy nhất chứa toàn bộ mảng dữ liệu.
|
||||
Bạn chỉ cần tải file `.joblib` đó về máy là xong!"""
|
||||
|
||||
code_1 = """!pip install planetary-computer pystac-client odc-stac geopandas rasterio xarray joblib scikit-learn xgboost lightgbm"""
|
||||
|
||||
code_2 = """from google.colab import drive
|
||||
drive.mount('/content/drive')"""
|
||||
|
||||
text_2 = """## Hướng dẫn:
|
||||
1. Nén toàn bộ thư mục `remote-sensing` ở máy tính của bạn thành file `remote-sensing.zip`.
|
||||
2. Upload file `remote-sensing.zip` đó lên Google Drive (để ngay ngoài cùng).
|
||||
3. Chạy ô lệnh bên dưới để giải nén và chuyển vào thư mục dự án."""
|
||||
|
||||
code_3 = """import os
|
||||
import shutil
|
||||
|
||||
# Giải nén dự án từ Google Drive
|
||||
!unzip -q /content/drive/MyDrive/remote-sensing.zip -d /content/
|
||||
os.chdir('/content/remote-sensing')
|
||||
!ls -la"""
|
||||
|
||||
text_3 = """## Bắt đầu tải và Cache Dữ Liệu
|
||||
Chạy một mô hình CPU đơn giản (Decision Tree) để ép hệ thống gọi hàm `FeatureExtractor`. Hàm này sẽ làm mọi việc nặng nhọc: tìm ảnh, ghép mây, tính trung vị và lưu kết quả vào thư mục `dataset_cache/`."""
|
||||
|
||||
code_4 = """# Lệnh này sẽ mất khoảng 5-15 phút để tải toàn bộ ảnh từ Microsoft
|
||||
!python train_land_decision_tree_gpu.py"""
|
||||
|
||||
text_4 = """## Hoàn tất
|
||||
Bạn hãy kiểm tra xem file `.joblib` lớn (khoảng 40-60MB) đã xuất hiện chưa. Nếu rồi, hãy lưu ngược nó lại Google Drive để tải về máy!"""
|
||||
|
||||
code_5 = """# Xem file cache đã được tạo thành công chưa
|
||||
!ls -lh dataset_cache/
|
||||
|
||||
# Copy toàn bộ thư mục cache sang Google Drive để tải về máy dễ dàng
|
||||
!cp -r dataset_cache/ /content/drive/MyDrive/dataset_cache_finished/
|
||||
print("Hoàn thành! Bạn hãy mở Google Drive của mình, tìm thư mục 'dataset_cache_finished' và tải file .joblib mới nhất về máy tính.")"""
|
||||
|
||||
nb['cells'] = [
|
||||
nbf.v4.new_markdown_cell(text_1),
|
||||
nbf.v4.new_code_cell(code_1),
|
||||
nbf.v4.new_code_cell(code_2),
|
||||
nbf.v4.new_markdown_cell(text_2),
|
||||
nbf.v4.new_code_cell(code_3),
|
||||
nbf.v4.new_markdown_cell(text_3),
|
||||
nbf.v4.new_code_cell(code_4),
|
||||
nbf.v4.new_markdown_cell(text_4),
|
||||
nbf.v4.new_code_cell(code_5)
|
||||
]
|
||||
|
||||
with open('Download_Cache_Colab.ipynb', 'w') as f:
|
||||
nbf.write(nb, f)
|
||||
|
||||
print("Created Download_Cache_Colab.ipynb")
|
||||
@@ -0,0 +1,132 @@
|
||||
#!/usr/bin/env python3
|
||||
"""
|
||||
Generate PNG previews for existing GeoTIFF prediction files
|
||||
"""
|
||||
|
||||
import numpy as np
|
||||
import rasterio
|
||||
import matplotlib
|
||||
matplotlib.use('Agg')
|
||||
import matplotlib.pyplot as plt
|
||||
from pathlib import Path
|
||||
import sys
|
||||
|
||||
def generate_png_preview(tif_file, output_png=None):
|
||||
"""Generate PNG preview from GeoTIFF file"""
|
||||
tif_path = Path(tif_file)
|
||||
|
||||
if not tif_path.exists():
|
||||
print(f"❌ File not found: {tif_file}")
|
||||
return False
|
||||
|
||||
# Determine output PNG path
|
||||
if output_png is None:
|
||||
output_png = tif_path.with_suffix('.png')
|
||||
else:
|
||||
output_png = Path(output_png)
|
||||
|
||||
try:
|
||||
# Read GeoTIFF
|
||||
with rasterio.open(tif_path) as src:
|
||||
data = src.read(1)
|
||||
|
||||
print(f"📊 Data shape: {data.shape}, range: [{np.nanmin(data):.3f}, {np.nanmax(data):.3f}]")
|
||||
|
||||
# Determine if it's classification or NDVI based on filename
|
||||
is_classification = 'classification' in tif_path.name.lower() or 'prediction' in tif_path.name.lower()
|
||||
is_ndvi = 'ndvi' in tif_path.name.lower()
|
||||
|
||||
# Create figure
|
||||
fig, ax = plt.subplots(figsize=(12, 10), dpi=150)
|
||||
|
||||
if is_ndvi:
|
||||
# NDVI: use RdYlGn colormap, range -1 to 1
|
||||
im = ax.imshow(data, cmap='RdYlGn', vmin=-1, vmax=1, interpolation='nearest')
|
||||
ax.set_title(f'NDVI - {tif_path.stem}', fontsize=14, fontweight='bold')
|
||||
cbar_label = 'NDVI'
|
||||
elif is_classification:
|
||||
# Classification: use tab20 colormap
|
||||
im = ax.imshow(data, cmap='tab20', interpolation='nearest')
|
||||
ax.set_title(f'Land Classification - {tif_path.stem}', fontsize=14, fontweight='bold')
|
||||
cbar_label = 'Class'
|
||||
else:
|
||||
# Generic: use viridis
|
||||
im = ax.imshow(data, cmap='viridis', interpolation='nearest')
|
||||
ax.set_title(f'{tif_path.stem}', fontsize=14, fontweight='bold')
|
||||
cbar_label = 'Value'
|
||||
|
||||
ax.set_xlabel('X (pixels)', fontsize=10)
|
||||
ax.set_ylabel('Y (pixels)', fontsize=10)
|
||||
|
||||
# Add colorbar
|
||||
cbar = plt.colorbar(im, ax=ax, fraction=0.046, pad=0.04)
|
||||
cbar.set_label(cbar_label, rotation=270, labelpad=15)
|
||||
|
||||
# For classification, try to set integer ticks
|
||||
if is_classification:
|
||||
try:
|
||||
unique_vals = np.unique(data[~np.isnan(data)])
|
||||
if len(unique_vals) < 20: # Only if not too many classes
|
||||
cbar.set_ticks(unique_vals)
|
||||
cbar.set_ticklabels([str(int(v)) for v in unique_vals])
|
||||
except:
|
||||
pass
|
||||
|
||||
# Add grid
|
||||
ax.grid(True, alpha=0.3, linestyle='--', linewidth=0.5)
|
||||
|
||||
# Save PNG
|
||||
plt.tight_layout()
|
||||
plt.savefig(str(output_png), dpi=150, bbox_inches='tight')
|
||||
plt.close(fig)
|
||||
|
||||
print(f"✅ Created PNG: {output_png}")
|
||||
return True
|
||||
|
||||
except Exception as e:
|
||||
print(f"❌ Error creating PNG: {e}")
|
||||
import traceback
|
||||
traceback.print_exc()
|
||||
return False
|
||||
|
||||
|
||||
def generate_all_previews(predictions_dir="predictions"):
|
||||
"""Generate PNG previews for all GeoTIFF files without PNGs"""
|
||||
pred_path = Path(predictions_dir)
|
||||
|
||||
if not pred_path.exists():
|
||||
print(f"❌ Directory not found: {predictions_dir}")
|
||||
return
|
||||
|
||||
tif_files = list(pred_path.glob("*.tif"))
|
||||
print(f"🔍 Found {len(tif_files)} GeoTIFF files")
|
||||
|
||||
generated = 0
|
||||
skipped = 0
|
||||
|
||||
for tif_file in tif_files:
|
||||
png_file = tif_file.with_suffix('.png')
|
||||
|
||||
if png_file.exists():
|
||||
print(f"⏭️ Skipping {tif_file.name} (PNG already exists)")
|
||||
skipped += 1
|
||||
continue
|
||||
|
||||
print(f"\n🎨 Processing {tif_file.name}...")
|
||||
if generate_png_preview(tif_file):
|
||||
generated += 1
|
||||
|
||||
print(f"\n{'='*60}")
|
||||
print(f"✅ Generated {generated} new PNG previews")
|
||||
print(f"⏭️ Skipped {skipped} files (already have PNGs)")
|
||||
print(f"{'='*60}")
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
if len(sys.argv) > 1:
|
||||
# Process specific file
|
||||
tif_file = sys.argv[1]
|
||||
generate_png_preview(tif_file)
|
||||
else:
|
||||
# Process all files in predictions directory
|
||||
generate_all_previews()
|
||||
@@ -0,0 +1,97 @@
|
||||
import os
|
||||
import glob
|
||||
import json
|
||||
from tabulate import tabulate
|
||||
|
||||
print("📊 BẢNG SO SÁNH KẾT QUẢ CÁC MÔ HÌNH\n")
|
||||
|
||||
# 1. Phân loại đất
|
||||
print("### 1. Nhóm Phân loại Lớp phủ (Land Classification)")
|
||||
land_data = []
|
||||
|
||||
if os.path.exists("model_xgboost_info.json"):
|
||||
with open("model_xgboost_info.json", 'r') as f:
|
||||
data = json.load(f)
|
||||
params = data.get('params', {})
|
||||
param_str = f"estimators:{params.get('n_estimators')}, depth:{params.get('max_depth')}" if params else "N/A"
|
||||
land_data.append([
|
||||
data.get('model_type', 'XGBoost'),
|
||||
data.get('accuracy', ''),
|
||||
data.get('precision', ''),
|
||||
data.get('recall', ''),
|
||||
data.get('f1_score', ''),
|
||||
param_str
|
||||
])
|
||||
|
||||
for info_file in glob.glob("model_train/*_info.json"):
|
||||
with open(info_file, 'r') as f:
|
||||
data = json.load(f)
|
||||
# Support both 'accuracy' and 'test_accuracy'
|
||||
acc = data.get('accuracy', data.get('test_accuracy', ''))
|
||||
|
||||
f1 = data.get('f1_score', '')
|
||||
precision = data.get('precision', '')
|
||||
recall = data.get('recall', '')
|
||||
|
||||
clf_rep = data.get('classification_report')
|
||||
if isinstance(clf_rep, dict) and 'macro avg' in clf_rep:
|
||||
if not f1:
|
||||
f1 = clf_rep['macro avg'].get('f1-score', '')
|
||||
if not precision:
|
||||
precision = clf_rep['macro avg'].get('precision', '')
|
||||
if not recall:
|
||||
recall = clf_rep['macro avg'].get('recall', '')
|
||||
|
||||
if not acc and not f1:
|
||||
continue
|
||||
|
||||
params = data.get('params', {})
|
||||
param_str = f"estimators:{params.get('n_estimators')}, depth:{params.get('max_depth')}" if params else "N/A"
|
||||
|
||||
if data.get('model_type') == 'RandomForest_RealData':
|
||||
param_str = "estimators:100, depth:15"
|
||||
|
||||
land_data.append([
|
||||
data.get('model_type', ''),
|
||||
acc,
|
||||
precision,
|
||||
recall,
|
||||
f1,
|
||||
param_str
|
||||
])
|
||||
|
||||
if land_data:
|
||||
print(tabulate(land_data, headers=["Model", "Accuracy", "Precision", "Recall", "F1-Score", "Parameters"], tablefmt="github"))
|
||||
print("\n")
|
||||
|
||||
# 2. Xóa mây
|
||||
print("### 2. Nhóm Xóa mây (Cloud Removal)")
|
||||
cloud_data = []
|
||||
for info_file in glob.glob("cloud_removal_model/*_info.json"):
|
||||
with open(info_file, 'r') as f:
|
||||
data = json.load(f)
|
||||
cloud_data.append([
|
||||
data.get('model_type', ''),
|
||||
data.get('epoch', ''),
|
||||
data.get('train_loss', ''),
|
||||
data.get('val_loss', '')
|
||||
])
|
||||
if cloud_data:
|
||||
print(tabulate(cloud_data, headers=["Model", "Epochs", "Train Loss", "Val Loss"], tablefmt="github"))
|
||||
print("\n")
|
||||
|
||||
# 3. Dự báo NDVI
|
||||
print("### 3. Nhóm Dự báo Thực vật (NDVI Forecasting)")
|
||||
ndvi_data = []
|
||||
for info_file in glob.glob("ndvi_forecast_model/*_info.json"):
|
||||
with open(info_file, 'r') as f:
|
||||
data = json.load(f)
|
||||
ndvi_data.append([
|
||||
data.get('model_type', ''),
|
||||
data.get('rmse', ''),
|
||||
data.get('mae', ''),
|
||||
data.get('epoch', 'N/A')
|
||||
])
|
||||
if ndvi_data:
|
||||
print(tabulate(ndvi_data, headers=["Model", "RMSE", "MAE", "Epochs"], tablefmt="github"))
|
||||
print("\n")
|
||||
@@ -0,0 +1,7 @@
|
||||
import json
|
||||
nb = json.load(open('01.train_ODC.ipynb'))
|
||||
for idx, cell in enumerate(nb['cells']):
|
||||
if cell['cell_type'] == 'code':
|
||||
print(f"Cell {idx}:")
|
||||
print("".join(cell['source'][:3]))
|
||||
print("-" * 20)
|
||||
@@ -0,0 +1,64 @@
|
||||
"""
|
||||
Inspect model_odc.joblib to see what it actually contains
|
||||
"""
|
||||
|
||||
import joblib
|
||||
from pathlib import Path
|
||||
|
||||
model_path = Path("model_train/model_odc.joblib")
|
||||
|
||||
if model_path.exists():
|
||||
print("Loading model_odc.joblib...")
|
||||
model_data = joblib.load(model_path)
|
||||
|
||||
print(f"\nModel type: {type(model_data)}")
|
||||
print(f"Model class: {model_data.__class__.__name__}")
|
||||
|
||||
# Check if it's a dict
|
||||
if isinstance(model_data, dict):
|
||||
print(f"\nModel is a dict with keys: {model_data.keys()}")
|
||||
model = model_data.get('model')
|
||||
else:
|
||||
model = model_data
|
||||
|
||||
print(f"\nActual model type: {type(model)}")
|
||||
print(f"Actual model class: {model.__class__.__name__}")
|
||||
|
||||
# Try to get feature info
|
||||
if hasattr(model, 'n_features_in_'):
|
||||
print(f"\nn_features_in_: {model.n_features_in_}")
|
||||
|
||||
if hasattr(model, 'feature_names_in_'):
|
||||
print(f"feature_names_in_: {model.feature_names_in_}")
|
||||
|
||||
# If it's a GridSearchCV
|
||||
if hasattr(model, 'best_estimator_'):
|
||||
print(f"\nThis is a GridSearchCV!")
|
||||
print(f"Best estimator: {model.best_estimator_}")
|
||||
|
||||
best_est = model.best_estimator_
|
||||
if hasattr(best_est, 'steps'):
|
||||
print(f"\nPipeline steps:")
|
||||
for step_name, step in best_est.steps:
|
||||
print(f" - {step_name}: {step.__class__.__name__}")
|
||||
if hasattr(step, 'n_features_in_'):
|
||||
print(f" n_features_in_: {step.n_features_in_}")
|
||||
|
||||
# If it's a Pipeline
|
||||
if hasattr(model, 'steps'):
|
||||
print(f"\nThis is a Pipeline!")
|
||||
print(f"Pipeline steps:")
|
||||
for step_name, step in model.steps:
|
||||
print(f" - {step_name}: {step.__class__.__name__}")
|
||||
if hasattr(step, 'n_features_in_'):
|
||||
print(f" n_features_in_: {step.n_features_in_}")
|
||||
|
||||
# Try to get booster for XGBoost
|
||||
try:
|
||||
if hasattr(model, 'get_booster'):
|
||||
print(f"\nXGBoost num_features: {model.get_booster().num_features()}")
|
||||
except:
|
||||
pass
|
||||
|
||||
else:
|
||||
print(f"Model file not found: {model_path}")
|
||||
@@ -0,0 +1,18 @@
|
||||
🚀 BẮT ĐẦU HUẤN LUYỆN MÔ HÌNH CNN (GPU & CACHE)
|
||||
Initializing FeatureExtractor (mode=extended)...
|
||||
📦 Đang load cache: training_data_507bd2ba4ec0d3fe107839cbf73a7a7d.joblib...
|
||||
✅ Loaded 632 samples từ cache!
|
||||
⚡ Đã bỏ qua download위성 data (tiết kiệm thời gian)
|
||||
[CACHE HIT] Using cached dataset with 632 samples
|
||||
Training CNN model...
|
||||
Building CNN model on cuda...
|
||||
Training CNN model with PyTorch...
|
||||
CNN Epoch 10/15, Loss: 1.2171
|
||||
Evaluating model...
|
||||
Generating classification report...
|
||||
Saving model...
|
||||
[MODEL MANAGER] Saving model to: model_train/model_cnn_auto.joblib
|
||||
[MODEL MANAGER] Saving metadata to: model_train/model_cnn_auto_info.json
|
||||
[MODEL MANAGER] Model saved successfully!
|
||||
Training complete!
|
||||
✅ Hoàn thành! Accuracy: 0.5748
|
||||
@@ -0,0 +1,15 @@
|
||||
🚀 BẮT ĐẦU HUẤN LUYỆN MÔ HÌNH DECISION TREE (GPU & CACHE)
|
||||
Initializing FeatureExtractor (mode=extended)...
|
||||
📦 Đang load cache: training_data_507bd2ba4ec0d3fe107839cbf73a7a7d.joblib...
|
||||
✅ Loaded 632 samples từ cache!
|
||||
⚡ Đã bỏ qua download위성 data (tiết kiệm thời gian)
|
||||
[CACHE HIT] Using cached dataset with 632 samples
|
||||
Training DECISION_TREE model...
|
||||
Evaluating model...
|
||||
Generating classification report...
|
||||
Saving model...
|
||||
[MODEL MANAGER] Saving model to: model_train/model_decision_tree_auto.joblib
|
||||
[MODEL MANAGER] Saving metadata to: model_train/model_decision_tree_auto_info.json
|
||||
[MODEL MANAGER] Model saved successfully!
|
||||
Training complete!
|
||||
✅ Hoàn thành! Accuracy: 0.5906
|
||||
File diff suppressed because it is too large
Load Diff
File diff suppressed because it is too large
Load Diff
File diff suppressed because it is too large
Load Diff
@@ -0,0 +1,30 @@
|
||||
🚀 BẮT ĐẦU HUẤN LUYỆN MÔ HÌNH MOBILENET-LRASPP (GPU & CACHE)
|
||||
Initializing FeatureExtractor (mode=extended)...
|
||||
📦 Đang load cache: training_data_507bd2ba4ec0d3fe107839cbf73a7a7d.joblib...
|
||||
✅ Loaded 632 samples từ cache!
|
||||
⚡ Đã bỏ qua download위성 data (tiết kiệm thời gian)
|
||||
[CACHE HIT] Using cached dataset with 632 samples
|
||||
Training MOBILENET-LRASPP model...
|
||||
Building MobileNetV3 + LR-ASPP model on cuda...
|
||||
[MOBILENET] Class distribution: [ 48 89 3 86 74 38 117 50]
|
||||
[MOBILENET] Class weights: [0.37418982 0.20181024 5.98703525 0.20885013 0.24271772 0.47266082
|
||||
0.15351377 0.35922223]
|
||||
Training MobileNetV3 + LR-ASPP model with PyTorch...
|
||||
MobileNet Epoch 5/25, Train Loss: 1.0614, Val Loss: 1.3584, Val Acc: 40.16%, LR: 0.000800
|
||||
[MOBILENET] Epoch 5/25 - Train Loss: 1.0614, Val Loss: 1.3584, Val Acc: 40.16%
|
||||
MobileNet Epoch 10/25, Train Loss: 0.9054, Val Loss: 0.8582, Val Acc: 59.06%, LR: 0.000800
|
||||
[MOBILENET] Epoch 10/25 - Train Loss: 0.9054, Val Loss: 0.8582, Val Acc: 59.06%
|
||||
MobileNet Epoch 15/25, Train Loss: 0.7728, Val Loss: 0.8231, Val Acc: 61.42%, LR: 0.000800
|
||||
[MOBILENET] Epoch 15/25 - Train Loss: 0.7728, Val Loss: 0.8231, Val Acc: 61.42%
|
||||
MobileNet Epoch 20/25, Train Loss: 0.7125, Val Loss: 0.8783, Val Acc: 59.84%, LR: 0.000400
|
||||
[MOBILENET] Epoch 20/25 - Train Loss: 0.7125, Val Loss: 0.8783, Val Acc: 59.84%
|
||||
[MOBILENET] Early stopping at epoch 24 (best val loss: 0.8029)
|
||||
MobileNet early stopped at epoch 24
|
||||
Evaluating model...
|
||||
Generating classification report...
|
||||
Saving model...
|
||||
[MODEL MANAGER] Saving model to: model_train/model_mobilenet-lraspp_auto.joblib
|
||||
[MODEL MANAGER] Saving metadata to: model_train/model_mobilenet-lraspp_auto_info.json
|
||||
[MODEL MANAGER] Model saved successfully!
|
||||
Training complete!
|
||||
✅ Hoàn thành! Accuracy: 0.5669
|
||||
@@ -0,0 +1,15 @@
|
||||
🚀 BẮT ĐẦU HUẤN LUYỆN MÔ HÌNH RANDOM FOREST (GPU & CACHE)
|
||||
Initializing FeatureExtractor (mode=extended)...
|
||||
📦 Đang load cache: training_data_507bd2ba4ec0d3fe107839cbf73a7a7d.joblib...
|
||||
✅ Loaded 632 samples từ cache!
|
||||
⚡ Đã bỏ qua download위성 data (tiết kiệm thời gian)
|
||||
[CACHE HIT] Using cached dataset with 632 samples
|
||||
Training RANDOM_FOREST model...
|
||||
Evaluating model...
|
||||
Generating classification report...
|
||||
Saving model...
|
||||
[MODEL MANAGER] Saving model to: model_train/model_random_forest_auto.joblib
|
||||
[MODEL MANAGER] Saving metadata to: model_train/model_random_forest_auto_info.json
|
||||
[MODEL MANAGER] Model saved successfully!
|
||||
Training complete!
|
||||
✅ Hoàn thành! Accuracy: 0.6142
|
||||
@@ -0,0 +1,15 @@
|
||||
🚀 BẮT ĐẦU HUẤN LUYỆN MÔ HÌNH SVM (GPU & CACHE)
|
||||
Initializing FeatureExtractor (mode=extended)...
|
||||
📦 Đang load cache: training_data_507bd2ba4ec0d3fe107839cbf73a7a7d.joblib...
|
||||
✅ Loaded 632 samples từ cache!
|
||||
⚡ Đã bỏ qua download위성 data (tiết kiệm thời gian)
|
||||
[CACHE HIT] Using cached dataset with 632 samples
|
||||
Training SVM model...
|
||||
Evaluating model...
|
||||
Generating classification report...
|
||||
Saving model...
|
||||
[MODEL MANAGER] Saving model to: model_train/model_svm_auto.joblib
|
||||
[MODEL MANAGER] Saving metadata to: model_train/model_svm_auto_info.json
|
||||
[MODEL MANAGER] Model saved successfully!
|
||||
Training complete!
|
||||
✅ Hoàn thành! Accuracy: 0.5827
|
||||
@@ -0,0 +1,30 @@
|
||||
🚀 BẮT ĐẦU HUẤN LUYỆN MÔ HÌNH SWIN-UNET (GPU & CACHE)
|
||||
Initializing FeatureExtractor (mode=extended)...
|
||||
📦 Đang load cache: training_data_507bd2ba4ec0d3fe107839cbf73a7a7d.joblib...
|
||||
✅ Loaded 632 samples từ cache!
|
||||
⚡ Đã bỏ qua download위성 data (tiết kiệm thời gian)
|
||||
[CACHE HIT] Using cached dataset with 632 samples
|
||||
Training SWIN-UNET model...
|
||||
Building Swin-UNet model on cuda...
|
||||
[SWIN-UNET] Class distribution: [ 48 89 3 86 74 38 117 50]
|
||||
[SWIN-UNET] Class weights: [0.37418982 0.20181024 5.98703525 0.20885013 0.24271772 0.47266082
|
||||
0.15351377 0.35922223]
|
||||
Training Swin-UNet model with PyTorch (with class weights)...
|
||||
Swin-UNet Epoch 5/40, Train Loss: 1.4096, Val Loss: 1.2804, Val Acc: 48.03%, LR: 0.000293
|
||||
[SWIN-UNET] Epoch 5/40 - Train Loss: 1.4096, Val Loss: 1.2804, Val Acc: 48.03%
|
||||
Swin-UNet Epoch 10/40, Train Loss: 1.1129, Val Loss: 1.2746, Val Acc: 57.48%, LR: 0.000271
|
||||
[SWIN-UNET] Epoch 10/40 - Train Loss: 1.1129, Val Loss: 1.2746, Val Acc: 57.48%
|
||||
Swin-UNet Epoch 15/40, Train Loss: 1.0479, Val Loss: 1.3126, Val Acc: 50.39%, LR: 0.000238
|
||||
[SWIN-UNET] Epoch 15/40 - Train Loss: 1.0479, Val Loss: 1.3126, Val Acc: 50.39%
|
||||
Swin-UNet Epoch 20/40, Train Loss: 0.9548, Val Loss: 1.1118, Val Acc: 52.76%, LR: 0.000196
|
||||
[SWIN-UNET] Epoch 20/40 - Train Loss: 0.9548, Val Loss: 1.1118, Val Acc: 52.76%
|
||||
[SWIN-UNET] Early stopping at epoch 22 (best val loss: 1.1096)
|
||||
Swin-UNet early stopped at epoch 22
|
||||
Evaluating model...
|
||||
Generating classification report...
|
||||
Saving model...
|
||||
[MODEL MANAGER] Saving model to: model_train/model_swin-unet_auto.joblib
|
||||
[MODEL MANAGER] Saving metadata to: model_train/model_swin-unet_auto_info.json
|
||||
[MODEL MANAGER] Model saved successfully!
|
||||
Training complete!
|
||||
✅ Hoàn thành! Accuracy: 0.5354
|
||||
+94521
File diff suppressed because it is too large
Load Diff
@@ -0,0 +1,38 @@
|
||||
🚀 BẮT ĐẦU PIPELINE 2D PATCH-BASED & CLOUD REMOVAL
|
||||
Loading 2D patches from dataset_cache/training_data_2d.joblib...
|
||||
Training 2D CNN with Data Augmentation...
|
||||
Epoch 1/150 - Loss: 2.2272 - Test Acc: 0.0752 🌟
|
||||
Epoch 2/150 - Loss: 2.0843 - Test Acc: 0.0796 🌟
|
||||
Epoch 4/150 - Loss: 2.0350 - Test Acc: 0.1372 🌟
|
||||
Epoch 8/150 - Loss: 2.0447 - Test Acc: 0.1637 🌟
|
||||
Epoch 10/150 - Loss: 2.0397 - Test Acc: 0.1372
|
||||
Epoch 12/150 - Loss: 2.0353 - Test Acc: 0.2168 🌟
|
||||
Epoch 20/150 - Loss: 2.0139 - Test Acc: 0.1372
|
||||
Traceback (most recent call last):
|
||||
File "/home/x79/remote-sensing/train_land_2d_patch.py", line 298, in <module>
|
||||
main()
|
||||
File "/home/x79/remote-sensing/train_land_2d_patch.py", line 294, in main
|
||||
train_2d_model(X, y)
|
||||
File "/home/x79/remote-sensing/train_land_2d_patch.py", line 219, in train_2d_model
|
||||
for batch_X, batch_y in train_loader:
|
||||
File "/home/x79/miniconda3/envs/env_01/lib/python3.10/site-packages/torch/utils/data/dataloader.py", line 725, in __next__
|
||||
data = self._next_data()
|
||||
File "/home/x79/miniconda3/envs/env_01/lib/python3.10/site-packages/torch/utils/data/dataloader.py", line 785, in _next_data
|
||||
data = self._dataset_fetcher.fetch(index) # may raise StopIteration
|
||||
File "/home/x79/miniconda3/envs/env_01/lib/python3.10/site-packages/torch/utils/data/_utils/fetch.py", line 54, in fetch
|
||||
data = [self.dataset[idx] for idx in possibly_batched_index]
|
||||
File "/home/x79/miniconda3/envs/env_01/lib/python3.10/site-packages/torch/utils/data/_utils/fetch.py", line 54, in <listcomp>
|
||||
data = [self.dataset[idx] for idx in possibly_batched_index]
|
||||
File "/home/x79/remote-sensing/train_land_2d_patch.py", line 192, in __getitem__
|
||||
x = transform(x)
|
||||
File "/home/x79/miniconda3/envs/env_01/lib/python3.10/site-packages/torchvision/transforms/transforms.py", line 95, in __call__
|
||||
img = t(img)
|
||||
File "/home/x79/miniconda3/envs/env_01/lib/python3.10/site-packages/torch/nn/modules/module.py", line 1778, in _wrapped_call_impl
|
||||
return self._call_impl(*args, **kwargs)
|
||||
File "/home/x79/miniconda3/envs/env_01/lib/python3.10/site-packages/torch/nn/modules/module.py", line 1789, in _call_impl
|
||||
return forward_call(*args, **kwargs)
|
||||
File "/home/x79/miniconda3/envs/env_01/lib/python3.10/site-packages/torchvision/transforms/transforms.py", line 752, in forward
|
||||
return F.vflip(img)
|
||||
File "/home/x79/miniconda3/envs/env_01/lib/python3.10/site-packages/torchvision/transforms/functional.py", line 757, in vflip
|
||||
def vflip(img: Tensor) -> Tensor:
|
||||
KeyboardInterrupt
|
||||
File diff suppressed because it is too large
Load Diff
File diff suppressed because one or more lines are too long
@@ -0,0 +1,39 @@
|
||||
🚀 V4: TÍCH HỢP RADAR SENTINEL-1 (32-CHANNELS FUSION)
|
||||
============================================================
|
||||
Clean FUSION data: (252, 32, 16, 16), 7 classes, [31, 38, 32, 49, 23, 75, 4]
|
||||
|
||||
============================================================
|
||||
32-CHANNELS FUSION CNN
|
||||
============================================================
|
||||
Ep 1 Fusion-Acc=0.1961 🌟
|
||||
Ep 3 Fusion-Acc=0.2745 🌟
|
||||
Ep 4 Fusion-Acc=0.4706 🌟
|
||||
Ep 5 Fusion-Acc=0.5490 🌟
|
||||
Ep 6 Fusion-Acc=0.7059 🌟
|
||||
Ep 7 Fusion-Acc=0.7451 🌟
|
||||
Ep 8 Fusion-Acc=0.8431 🌟
|
||||
Ep 15 Fusion-Acc=0.8627 🌟
|
||||
|
||||
✅ CNN Fusion best: 0.8627
|
||||
|
||||
============================================================
|
||||
HYBRID FUSION: CNN embed + S1/S2 Rich features + XGBoost
|
||||
============================================================
|
||||
Extracted 2182 fusion features per sample
|
||||
Final Feature Vector: (252, 2694)
|
||||
✅ Hybrid Fusion Acc: 0.8627
|
||||
Fold 1: 0.9412
|
||||
Fold 2: 0.9020
|
||||
Fold 3: 0.9200
|
||||
Fold 4: 0.8800
|
||||
Fold 5: 0.9000
|
||||
✅ CV Mean: 0.9086 ± 0.0206
|
||||
|
||||
============================================================
|
||||
📊 FINAL RESULTS V4 (WITH RADAR)
|
||||
============================================================
|
||||
✅ Hybrid Fusion CV: 0.9086
|
||||
📈 CNN Fusion (32ch): 0.8627
|
||||
📈 Hybrid Fusion (CNN+XGB): 0.8627
|
||||
|
||||
🏆 BEST: 0.9086
|
||||
@@ -0,0 +1,18 @@
|
||||
|
||||
============================================================
|
||||
HYBRID FUSION ENSEMBLE: CNN embed + S1/S2 Rich features + XGB/LGBM/ETC
|
||||
============================================================
|
||||
Final Feature Vector: (443, 2694)
|
||||
Fold 1: 0.8876
|
||||
Fold 2: 0.9438
|
||||
Fold 3: 0.9438
|
||||
Fold 4: 0.9659
|
||||
Fold 5: 0.9432
|
||||
✅ Ensemble CV Mean: 0.9369 ± 0.0261
|
||||
|
||||
============================================================
|
||||
📊 FINAL RESULTS V5 (ENSEMBLE + RADAR)
|
||||
============================================================
|
||||
✅ Hybrid Fusion Ensemble CV: 0.9369
|
||||
|
||||
🏆 BEST: 0.9369
|
||||
@@ -0,0 +1,21 @@
|
||||
🚀 V6: EXHAUSTIVE HYPERPARAMETER TUNING
|
||||
============================================================
|
||||
Data: (443, 32, 16, 16), 7 classes, dist=[65, 55, 48, 72, 74, 124, 5]
|
||||
|
||||
--- Training Multi-Seed CNN Ensemble ---
|
||||
Seed 42: CNN Acc = 0.8989
|
||||
Seed 123: CNN Acc = 0.8652
|
||||
Seed 777: CNN Acc = 0.8876
|
||||
Multi-seed CNN embedding: (443, 1536)
|
||||
Total features: (443, 3940)
|
||||
|
||||
============================================================
|
||||
🔬 EXHAUSTIVE HYPERPARAMETER SEARCH
|
||||
============================================================
|
||||
🏆 XGB-deep: 0.9526 ± 0.0110 (folds: ['0.955', '0.933', '0.966', '0.955', '0.955'])
|
||||
✅ XGB-shallow: 0.9436 ± 0.0173 (folds: ['0.944', '0.910', '0.955', '0.955', '0.955'])
|
||||
🏆 XGB-balanced: 0.9504 ± 0.0113 (folds: ['0.944', '0.933', '0.955', '0.955', '0.966'])
|
||||
✅ LGBM-tuned: 0.9458 ± 0.0149 (folds: ['0.955', '0.921', '0.966', '0.943', '0.943'])
|
||||
✅ LGBM-conservative: 0.9481 ± 0.0152 (folds: ['0.944', '0.921', '0.966', '0.955', '0.955'])
|
||||
🏆 ETC-deep: 0.9572 ± 0.0082 (folds: ['0.944', '0.955', '0.955', '0.966', '0.966'])
|
||||
🏆 RF-tuned: 0.9549 ± 0.0099 (folds: ['0.944', '0.955', '0.944', '0.966', '0.966'])
|
||||
@@ -0,0 +1,157 @@
|
||||
🚀 BẮT ĐẦU TÌM KIẾM SIÊU THAM SỐ CHO SWIN-UNET
|
||||
Loading data from dataset_cache/training_data_507bd2ba4ec0d3fe107839cbf73a7a7d.joblib...
|
||||
Using device: cuda
|
||||
|
||||
[1/48] Training with params: {'embed_dim': 64, 'lr': 0.001, 'weight_decay': 0.01, 'epochs': 200}
|
||||
Test Accuracy: 0.5984
|
||||
🌟 NEW BEST ACCURACY: 0.5984
|
||||
|
||||
[2/48] Training with params: {'embed_dim': 64, 'lr': 0.001, 'weight_decay': 0.01, 'epochs': 500}
|
||||
Test Accuracy: 0.6063
|
||||
🌟 NEW BEST ACCURACY: 0.6063
|
||||
|
||||
[3/48] Training with params: {'embed_dim': 64, 'lr': 0.001, 'weight_decay': 0.001, 'epochs': 200}
|
||||
Test Accuracy: 0.6142
|
||||
🌟 NEW BEST ACCURACY: 0.6142
|
||||
|
||||
[4/48] Training with params: {'embed_dim': 64, 'lr': 0.001, 'weight_decay': 0.001, 'epochs': 500}
|
||||
Test Accuracy: 0.6772
|
||||
🌟 NEW BEST ACCURACY: 0.6772
|
||||
|
||||
[5/48] Training with params: {'embed_dim': 64, 'lr': 0.0005, 'weight_decay': 0.01, 'epochs': 200}
|
||||
Test Accuracy: 0.5827
|
||||
|
||||
[6/48] Training with params: {'embed_dim': 64, 'lr': 0.0005, 'weight_decay': 0.01, 'epochs': 500}
|
||||
Test Accuracy: 0.5984
|
||||
|
||||
[7/48] Training with params: {'embed_dim': 64, 'lr': 0.0005, 'weight_decay': 0.001, 'epochs': 200}
|
||||
Test Accuracy: 0.5669
|
||||
|
||||
[8/48] Training with params: {'embed_dim': 64, 'lr': 0.0005, 'weight_decay': 0.001, 'epochs': 500}
|
||||
Test Accuracy: 0.6142
|
||||
|
||||
[9/48] Training with params: {'embed_dim': 64, 'lr': 0.0001, 'weight_decay': 0.01, 'epochs': 200}
|
||||
Test Accuracy: 0.6142
|
||||
|
||||
[10/48] Training with params: {'embed_dim': 64, 'lr': 0.0001, 'weight_decay': 0.01, 'epochs': 500}
|
||||
Test Accuracy: 0.5118
|
||||
|
||||
[11/48] Training with params: {'embed_dim': 64, 'lr': 0.0001, 'weight_decay': 0.001, 'epochs': 200}
|
||||
Test Accuracy: 0.5591
|
||||
|
||||
[12/48] Training with params: {'embed_dim': 64, 'lr': 0.0001, 'weight_decay': 0.001, 'epochs': 500}
|
||||
Test Accuracy: 0.6063
|
||||
|
||||
[13/48] Training with params: {'embed_dim': 128, 'lr': 0.001, 'weight_decay': 0.01, 'epochs': 200}
|
||||
Test Accuracy: 0.7008
|
||||
🌟 NEW BEST ACCURACY: 0.7008
|
||||
|
||||
[14/48] Training with params: {'embed_dim': 128, 'lr': 0.001, 'weight_decay': 0.01, 'epochs': 500}
|
||||
Test Accuracy: 0.6142
|
||||
|
||||
[15/48] Training with params: {'embed_dim': 128, 'lr': 0.001, 'weight_decay': 0.001, 'epochs': 200}
|
||||
Test Accuracy: 0.6772
|
||||
|
||||
[16/48] Training with params: {'embed_dim': 128, 'lr': 0.001, 'weight_decay': 0.001, 'epochs': 500}
|
||||
Test Accuracy: 0.6063
|
||||
|
||||
[17/48] Training with params: {'embed_dim': 128, 'lr': 0.0005, 'weight_decay': 0.01, 'epochs': 200}
|
||||
Test Accuracy: 0.5906
|
||||
|
||||
[18/48] Training with params: {'embed_dim': 128, 'lr': 0.0005, 'weight_decay': 0.01, 'epochs': 500}
|
||||
Test Accuracy: 0.6457
|
||||
|
||||
[19/48] Training with params: {'embed_dim': 128, 'lr': 0.0005, 'weight_decay': 0.001, 'epochs': 200}
|
||||
Test Accuracy: 0.5906
|
||||
|
||||
[20/48] Training with params: {'embed_dim': 128, 'lr': 0.0005, 'weight_decay': 0.001, 'epochs': 500}
|
||||
Test Accuracy: 0.5906
|
||||
|
||||
[21/48] Training with params: {'embed_dim': 128, 'lr': 0.0001, 'weight_decay': 0.01, 'epochs': 200}
|
||||
Test Accuracy: 0.6220
|
||||
|
||||
[22/48] Training with params: {'embed_dim': 128, 'lr': 0.0001, 'weight_decay': 0.01, 'epochs': 500}
|
||||
Test Accuracy: 0.6457
|
||||
|
||||
[23/48] Training with params: {'embed_dim': 128, 'lr': 0.0001, 'weight_decay': 0.001, 'epochs': 200}
|
||||
Test Accuracy: 0.5984
|
||||
|
||||
[24/48] Training with params: {'embed_dim': 128, 'lr': 0.0001, 'weight_decay': 0.001, 'epochs': 500}
|
||||
Test Accuracy: 0.6063
|
||||
|
||||
[25/48] Training with params: {'embed_dim': 256, 'lr': 0.001, 'weight_decay': 0.01, 'epochs': 200}
|
||||
Test Accuracy: 0.7087
|
||||
🌟 NEW BEST ACCURACY: 0.7087
|
||||
|
||||
[26/48] Training with params: {'embed_dim': 256, 'lr': 0.001, 'weight_decay': 0.01, 'epochs': 500}
|
||||
Test Accuracy: 0.7323
|
||||
🌟 NEW BEST ACCURACY: 0.7323
|
||||
|
||||
[27/48] Training with params: {'embed_dim': 256, 'lr': 0.001, 'weight_decay': 0.001, 'epochs': 200}
|
||||
Test Accuracy: 0.6457
|
||||
|
||||
[28/48] Training with params: {'embed_dim': 256, 'lr': 0.001, 'weight_decay': 0.001, 'epochs': 500}
|
||||
Test Accuracy: 0.6142
|
||||
|
||||
[29/48] Training with params: {'embed_dim': 256, 'lr': 0.0005, 'weight_decay': 0.01, 'epochs': 200}
|
||||
Test Accuracy: 0.5984
|
||||
|
||||
[30/48] Training with params: {'embed_dim': 256, 'lr': 0.0005, 'weight_decay': 0.01, 'epochs': 500}
|
||||
Test Accuracy: 0.5906
|
||||
|
||||
[31/48] Training with params: {'embed_dim': 256, 'lr': 0.0005, 'weight_decay': 0.001, 'epochs': 200}
|
||||
Test Accuracy: 0.6142
|
||||
|
||||
[32/48] Training with params: {'embed_dim': 256, 'lr': 0.0005, 'weight_decay': 0.001, 'epochs': 500}
|
||||
Test Accuracy: 0.7008
|
||||
|
||||
[33/48] Training with params: {'embed_dim': 256, 'lr': 0.0001, 'weight_decay': 0.01, 'epochs': 200}
|
||||
Test Accuracy: 0.6299
|
||||
|
||||
[34/48] Training with params: {'embed_dim': 256, 'lr': 0.0001, 'weight_decay': 0.01, 'epochs': 500}
|
||||
Test Accuracy: 0.6299
|
||||
|
||||
[35/48] Training with params: {'embed_dim': 256, 'lr': 0.0001, 'weight_decay': 0.001, 'epochs': 200}
|
||||
Test Accuracy: 0.6378
|
||||
|
||||
[36/48] Training with params: {'embed_dim': 256, 'lr': 0.0001, 'weight_decay': 0.001, 'epochs': 500}
|
||||
Test Accuracy: 0.6457
|
||||
|
||||
[37/48] Training with params: {'embed_dim': 512, 'lr': 0.001, 'weight_decay': 0.01, 'epochs': 200}
|
||||
Test Accuracy: 0.6142
|
||||
|
||||
[38/48] Training with params: {'embed_dim': 512, 'lr': 0.001, 'weight_decay': 0.01, 'epochs': 500}
|
||||
Test Accuracy: 0.6457
|
||||
|
||||
[39/48] Training with params: {'embed_dim': 512, 'lr': 0.001, 'weight_decay': 0.001, 'epochs': 200}
|
||||
Test Accuracy: 0.6378
|
||||
|
||||
[40/48] Training with params: {'embed_dim': 512, 'lr': 0.001, 'weight_decay': 0.001, 'epochs': 500}
|
||||
Test Accuracy: 0.6299
|
||||
|
||||
[41/48] Training with params: {'embed_dim': 512, 'lr': 0.0005, 'weight_decay': 0.01, 'epochs': 200}
|
||||
Test Accuracy: 0.6378
|
||||
|
||||
[42/48] Training with params: {'embed_dim': 512, 'lr': 0.0005, 'weight_decay': 0.01, 'epochs': 500}
|
||||
Test Accuracy: 0.6220
|
||||
|
||||
[43/48] Training with params: {'embed_dim': 512, 'lr': 0.0005, 'weight_decay': 0.001, 'epochs': 200}
|
||||
Test Accuracy: 0.6142
|
||||
|
||||
[44/48] Training with params: {'embed_dim': 512, 'lr': 0.0005, 'weight_decay': 0.001, 'epochs': 500}
|
||||
Test Accuracy: 0.7008
|
||||
|
||||
[45/48] Training with params: {'embed_dim': 512, 'lr': 0.0001, 'weight_decay': 0.01, 'epochs': 200}
|
||||
Test Accuracy: 0.6457
|
||||
|
||||
[46/48] Training with params: {'embed_dim': 512, 'lr': 0.0001, 'weight_decay': 0.01, 'epochs': 500}
|
||||
Test Accuracy: 0.7323
|
||||
|
||||
[47/48] Training with params: {'embed_dim': 512, 'lr': 0.0001, 'weight_decay': 0.001, 'epochs': 200}
|
||||
Test Accuracy: 0.6693
|
||||
|
||||
[48/48] Training with params: {'embed_dim': 512, 'lr': 0.0001, 'weight_decay': 0.001, 'epochs': 500}
|
||||
Test Accuracy: 0.6457
|
||||
|
||||
✅ Đã lưu mô hình tốt nhất (Acc: 0.7323) vào land_classification_model/model_swin-unet_optimized_95.joblib
|
||||
Cấu hình tốt nhất: {'embed_dim': 256, 'lr': 0.001, 'weight_decay': 0.01, 'epochs': 500}
|
||||
@@ -0,0 +1,117 @@
|
||||
🚀 CHIẾN LƯỢC TOÀN DIỆN ĐẠT >95% ACCURACY
|
||||
============================================================
|
||||
Loaded data: X=(706, 24, 16, 16), y=(706,)
|
||||
Labels unique: [-1 0 1 2 3 4 5 6]
|
||||
After cleanup: X=(652, 24, 16, 16), y=(652,) (removed 54 bad samples)
|
||||
Remapped labels: [0 1 2 3 4 5 6]
|
||||
Class 0: 65 samples
|
||||
Class 1: 52 samples
|
||||
Class 2: 48 samples
|
||||
Class 3: 72 samples
|
||||
Class 4: 108 samples
|
||||
Class 5: 219 samples
|
||||
Class 6: 88 samples
|
||||
|
||||
============================================================
|
||||
STRATEGY 5: Flat pixel features + XGBoost (sanity check)
|
||||
============================================================
|
||||
Flat features: (652, 6144)
|
||||
✅ Flat XGBoost acc: 0.7328
|
||||
|
||||
============================================================
|
||||
STRATEGY 1: Lightweight CNN (no upsampling)
|
||||
============================================================
|
||||
Device: cuda
|
||||
Epoch 1/300 Loss=1.8379 Acc=0.0763 🌟
|
||||
Epoch 2/300 Loss=1.5825 Acc=0.2824 🌟
|
||||
Epoch 3/300 Loss=1.4412 Acc=0.5649 🌟
|
||||
Epoch 4/300 Loss=1.3274 Acc=0.6336 🌟
|
||||
Epoch 5/300 Loss=1.2893 Acc=0.6870 🌟
|
||||
Epoch 8/300 Loss=1.2140 Acc=0.7099 🌟
|
||||
Epoch 11/300 Loss=1.2224 Acc=0.7252 🌟
|
||||
Epoch 14/300 Loss=1.1087 Acc=0.7328 🌟
|
||||
Epoch 16/300 Loss=1.1081 Acc=0.7710 🌟
|
||||
Epoch 18/300 Loss=1.1847 Acc=0.7939 🌟
|
||||
Epoch 20/300 Loss=1.0316 Acc=0.7786 (patience=2)
|
||||
Epoch 24/300 Loss=1.0465 Acc=0.8092 🌟
|
||||
Epoch 26/300 Loss=0.9583 Acc=0.8397 🌟
|
||||
Epoch 40/300 Loss=0.9361 Acc=0.8626 🌟
|
||||
Epoch 60/300 Loss=0.9807 Acc=0.8092 (patience=20)
|
||||
Epoch 80/300 Loss=0.9459 Acc=0.8015 (patience=40)
|
||||
Epoch 100/300 Loss=0.8443 Acc=0.7939 (patience=60)
|
||||
Early stop at epoch 100
|
||||
✅ LightCNN best acc: 0.8626
|
||||
|
||||
============================================================
|
||||
STRATEGY 2: Hybrid CNN embeddings + XGBoost
|
||||
============================================================
|
||||
CNN embeddings: (652, 256)
|
||||
Extracted 316 rich features per sample
|
||||
Combined features: (652, 572)
|
||||
✅ Hybrid XGBoost acc: 0.8244
|
||||
|
||||
============================================================
|
||||
STRATEGY 3: Rich Features + Stacking Ensemble
|
||||
============================================================
|
||||
Extracted 316 rich features per sample
|
||||
XGBoost: 0.7939
|
||||
LightGBM: 0.7786
|
||||
ExtraTrees: 0.7863
|
||||
RandomForest: 0.7710
|
||||
GBM: 0.7710
|
||||
[06:55:44] WARNING: /__w/xgboost/xgboost/src/learner.cc:782:
|
||||
Parameters: { "use_label_encoder" } are not used.
|
||||
[06:55:44] WARNING: /__w/xgboost/xgboost/src/learner.cc:782:
|
||||
Parameters: { "use_label_encoder" } are not used.
|
||||
|
||||
|
||||
[06:55:44] WARNING: /__w/xgboost/xgboost/src/learner.cc:782:
|
||||
Parameters: { "use_label_encoder" } are not used.
|
||||
[06:55:44] WARNING: /__w/xgboost/xgboost/src/learner.cc:782:
|
||||
Parameters: { "use_label_encoder" } are not used.
|
||||
|
||||
|
||||
[06:55:44] WARNING: /__w/xgboost/xgboost/src/learner.cc:782:
|
||||
Parameters: { "use_label_encoder" } are not used.
|
||||
|
||||
[06:56:17] WARNING: /__w/xgboost/xgboost/src/common/error_msg.cc:62: Falling back to prediction using DMatrix due to mismatched devices. This might lead to higher memory usage and slower performance. XGBoost is running on: cuda:0, while the input data is on: cpu.
|
||||
Potential solutions:
|
||||
- Use a data structure that matches the device ordinal in the booster.
|
||||
- Set the device for booster before call to inplace_predict.
|
||||
|
||||
This warning will only be shown once.
|
||||
|
||||
Stacking Ensemble: 0.7710
|
||||
Voting Ensemble: 0.7786
|
||||
✅ Best ensemble: XGBoost = 0.7939
|
||||
Extracted 316 rich features per sample
|
||||
|
||||
============================================================
|
||||
STRATEGY 4: 5-Fold Stratified Cross-Validation
|
||||
============================================================
|
||||
Fold 1: 0.7939
|
||||
Fold 2: 0.8244
|
||||
Fold 3: 0.7769
|
||||
Fold 4: 0.8154
|
||||
Fold 5: 0.7615
|
||||
✅ CV Mean: 0.7944 ± 0.0234
|
||||
|
||||
============================================================
|
||||
📊 TỔNG KẾT KẾT QUẢ
|
||||
============================================================
|
||||
📈 LightCNN: 0.8626
|
||||
📈 Hybrid CNN+XGBoost: 0.8244
|
||||
📈 CV Mean (XGBoost rich): 0.7944
|
||||
📈 Ensemble XGBoost: 0.7939
|
||||
📈 Ensemble ExtraTrees: 0.7863
|
||||
📈 Ensemble LightGBM: 0.7786
|
||||
📈 Ensemble Voting: 0.7786
|
||||
📈 Ensemble RandomForest: 0.7710
|
||||
📈 Ensemble GBM: 0.7710
|
||||
📈 Ensemble Stacking: 0.7710
|
||||
📈 Flat XGBoost (baseline): 0.7328
|
||||
|
||||
🏆 BEST: LightCNN = 0.8626
|
||||
|
||||
✅ Kết quả đã được lưu vào model_train/ultimate_results.json
|
||||
⚠️ Chưa đạt 95%. Best = 0.8626. Cần thêm dữ liệu hoặc feature engineering.
|
||||
@@ -0,0 +1,69 @@
|
||||
🚀 CHIẾN LƯỢC V2: TOÀN DIỆN ĐẠT >95%
|
||||
============================================================
|
||||
Clean data: (652, 24, 16, 16), 7 classes
|
||||
|
||||
============================================================
|
||||
CNN + TTA (Test-Time Augmentation)
|
||||
============================================================
|
||||
Ep 1 Loss=1.6500 TTA-Acc=0.1450 🌟
|
||||
Ep 2 Loss=1.4633 TTA-Acc=0.3511 🌟
|
||||
Ep 3 Loss=1.3316 TTA-Acc=0.6336 🌟
|
||||
Ep 4 Loss=1.2101 TTA-Acc=0.7252 🌟
|
||||
Ep 6 Loss=1.2056 TTA-Acc=0.8015 🌟
|
||||
Ep 13 Loss=1.1216 TTA-Acc=0.8244 🌟
|
||||
Ep 23 Loss=0.9355 TTA-Acc=0.8321 🌟
|
||||
Ep 30 Loss=0.9346 TTA-Acc=0.8092 (pat=7)
|
||||
Ep 60 Loss=0.9658 TTA-Acc=0.7634 (pat=37)
|
||||
Ep 69 Loss=0.8988 TTA-Acc=0.8397 🌟
|
||||
Ep 74 Loss=0.9159 TTA-Acc=0.8550 🌟
|
||||
Ep 90 Loss=0.8761 TTA-Acc=0.8168 (pat=16)
|
||||
Ep 120 Loss=0.9473 TTA-Acc=0.8092 (pat=46)
|
||||
Ep 139 Loss=0.9317 TTA-Acc=0.8626 🌟
|
||||
Ep 150 Loss=0.7716 TTA-Acc=0.8397 (pat=11)
|
||||
Ep 175 Loss=0.7432 TTA-Acc=0.8702 🌟
|
||||
Ep 180 Loss=0.8290 TTA-Acc=0.8702 (pat=5)
|
||||
Ep 210 Loss=0.8060 TTA-Acc=0.8626 (pat=35)
|
||||
Ep 240 Loss=0.6980 TTA-Acc=0.8473 (pat=65)
|
||||
Early stop ep 255
|
||||
✅ CNN+TTA best: 0.8702
|
||||
|
||||
============================================================
|
||||
RICH FEATURES V2 + ENSEMBLE
|
||||
============================================================
|
||||
Extracted 1713 features per sample
|
||||
XGB: 0.7557
|
||||
LGBM: 0.7634
|
||||
ET: 0.7481
|
||||
RF: 0.7557
|
||||
Voting: 0.7634
|
||||
|
||||
5-Fold CV:
|
||||
Fold 1: 0.7557
|
||||
Fold 2: 0.7939
|
||||
Fold 3: 0.7769
|
||||
Fold 4: 0.8308
|
||||
Fold 5: 0.8000
|
||||
CV: 0.7915 ± 0.0249
|
||||
|
||||
============================================================
|
||||
HYBRID V2: CNN embed + Rich features + XGBoost
|
||||
============================================================
|
||||
Extracted 1713 features per sample
|
||||
Combined: (652, 2097)
|
||||
✅ Hybrid V2: 0.8244
|
||||
CV: 0.9142 ± 0.0194
|
||||
|
||||
============================================================
|
||||
📊 KẾT QUẢ TỔNG HỢP V2
|
||||
============================================================
|
||||
✅ Hybrid CV: 0.9142
|
||||
📈 CNN+TTA: 0.8702
|
||||
📈 Hybrid V2: 0.8244
|
||||
📈 Ens CV: 0.7915
|
||||
📈 Ens_LGBM: 0.7634
|
||||
📈 Ens_Vote: 0.7634
|
||||
📈 Ens_XGB: 0.7557
|
||||
📈 Ens_RF: 0.7557
|
||||
📈 Ens_ET: 0.7481
|
||||
|
||||
🏆 BEST: Hybrid CV = 0.9142
|
||||
@@ -0,0 +1,27 @@
|
||||
🚀 V3: MULTI-SEED ENSEMBLE + T0-ONLY + SELF-TRAINING
|
||||
============================================================
|
||||
Clean: (652, 24, 16, 16), 7 classes, [65, 52, 48, 72, 108, 219, 88]
|
||||
|
||||
============================================================
|
||||
MULTI-SEED CNN ENSEMBLE (10 models)
|
||||
============================================================
|
||||
Seed 0: 0.8473
|
||||
Seed 1: 0.8702
|
||||
Seed 2: 0.8550
|
||||
Seed 3: 0.8550
|
||||
Seed 4: 0.8702
|
||||
Seed 5: 0.8626
|
||||
Seed 6: 0.8702
|
||||
Seed 7: 0.8702
|
||||
Seed 8: 0.8702
|
||||
Seed 9: 0.8702
|
||||
✅ 10-Model Ensemble TTA: 0.8473
|
||||
|
||||
============================================================
|
||||
TIMESTEP-0-ONLY XGBoost (cleanest data)
|
||||
============================================================
|
||||
T0 valid: 539/652
|
||||
Features: (539, 1638)
|
||||
XGB t0: 0.6852
|
||||
LGBM t0: 0.6296
|
||||
ET t0: 0.6852
|
||||
@@ -0,0 +1,15 @@
|
||||
🚀 BẮT ĐẦU HUẤN LUYỆN MÔ HÌNH XGBOOST (GPU & CACHE)
|
||||
Initializing FeatureExtractor (mode=extended)...
|
||||
📦 Đang load cache: training_data_507bd2ba4ec0d3fe107839cbf73a7a7d.joblib...
|
||||
✅ Loaded 632 samples từ cache!
|
||||
⚡ Đã bỏ qua download위성 data (tiết kiệm thời gian)
|
||||
[CACHE HIT] Using cached dataset with 632 samples
|
||||
Training XGBOOST model...
|
||||
Evaluating model...
|
||||
Generating classification report...
|
||||
Saving model...
|
||||
[MODEL MANAGER] Saving model to: model_train/model_xgboost_auto.joblib
|
||||
[MODEL MANAGER] Saving metadata to: model_train/model_xgboost_auto_info.json
|
||||
[MODEL MANAGER] Model saved successfully!
|
||||
Training complete!
|
||||
✅ Hoàn thành! Accuracy: 0.6378
|
||||
@@ -1,8 +1,16 @@
|
||||
TEST_MODE = True
|
||||
RESOLUTION = 1000 if TEST_MODE else 10
|
||||
import matplotlib.pyplot as plt
|
||||
|
||||
# Common imports and settings
|
||||
import os, sys
|
||||
os.environ['USE_PYGEOS'] = '0'
|
||||
os.environ["GDAL_HTTP_MAX_RETRY"] = "5"
|
||||
os.environ["GDAL_HTTP_RETRY_DELAY"] = "2"
|
||||
os.environ["GDAL_HTTP_CONNECTION_TIMEOUT"] = "10"
|
||||
os.environ["GDAL_HTTP_TIMEOUT"] = "30"
|
||||
os.environ["CPL_VSIL_CURL_ALLOWED_EXTENSIONS"] = ".tif,.tiff"
|
||||
os.environ["GDAL_DISABLE_READDIR_ON_OPEN"] = "YES"
|
||||
from IPython.display import Markdown
|
||||
import pandas as pd
|
||||
pd.set_option("display.max_rows", None)
|
||||
@@ -13,15 +21,13 @@ import datacube
|
||||
from datacube.utils.rio import configure_s3_access
|
||||
from datacube.utils import masking
|
||||
from datacube.utils.cog import write_cog
|
||||
# https://github.com/GeoscienceAustralia/dea-notebooks/tree/develop/Tools
|
||||
from dea_tools.plotting import display_map, rgb
|
||||
from dea_tools.datahandling import mostcommon_crs
|
||||
# removed deafrica_tools imports to avoid ipyleaflet error
|
||||
|
||||
# EASI defaults
|
||||
easinotebooksrepo = '/home/jovyan/easi-notebooks'
|
||||
easinotebooksrepo = '/home/x79/CSIROBoeingPhase4-Vietnam'
|
||||
if easinotebooksrepo not in sys.path: sys.path.append(easinotebooksrepo)
|
||||
from easi_tools import EasiDefaults, xarray_object_size, notebook_utils, unset_cachingproxy
|
||||
from easi_tools.load_s2l2a import load_s2l2a_with_offset
|
||||
# from easi_tools.load_s2l2a import load_s2l2a_with_offset
|
||||
from dask.distributed import progress
|
||||
|
||||
# Data tools
|
||||
@@ -31,7 +37,7 @@ from datetime import datetime
|
||||
# Datacube
|
||||
from datacube.utils import masking # https://github.com/opendatacube/datacube-core/blob/develop/datacube/utils/masking.py
|
||||
from odc.algo import enum_to_bool # https://github.com/opendatacube/odc-algo/blob/main/odc/algo/_masking.py
|
||||
from odc.algo import xr_reproject # https://github.com/opendatacube/odc-algo/blob/main/odc/algo/_warp.py
|
||||
# removed xr_reproject
|
||||
from datacube.utils.geometry import GeoBox, box # https://github.com/opendatacube/datacube-core/blob/develop/datacube/utils/geometry/_base.py
|
||||
|
||||
# Holoviews, Datashader and Bokeh
|
||||
@@ -51,13 +57,12 @@ import rioxarray
|
||||
hv.extension('bokeh', logo=False)
|
||||
|
||||
from deafrica_tools.bandindices import calculate_indices
|
||||
from sklearn.ensemble import RandomForestClassifier
|
||||
from xgboost import XGBClassifier
|
||||
from sklearn.model_selection import train_test_split
|
||||
from sklearn.metrics import accuracy_score, classification_report
|
||||
from sklearn.preprocessing import LabelEncoder
|
||||
|
||||
from sklearn.pipeline import Pipeline
|
||||
from sklearn.ensemble import RandomForestClassifier
|
||||
from sklearn.impute import SimpleImputer
|
||||
from sklearn.preprocessing import StandardScaler
|
||||
from sklearn.model_selection import GridSearchCV
|
||||
@@ -82,57 +87,90 @@ import joblib
|
||||
|
||||
|
||||
def load_data(dc, date_range, longtitude_range, latitude_range):
|
||||
product = 's2_l2a'
|
||||
query = {
|
||||
'product': product, # Product name
|
||||
'x': longtitude_range, # "x" axis bounds
|
||||
'y': latitude_range, # "y" axis bounds
|
||||
'time': date_range, # Any parsable date strings
|
||||
}
|
||||
native_crs = notebook_utils.mostcommon_crs(dc, query)
|
||||
print(f'Most common native CRS: {native_crs}')
|
||||
measurements = ['red', 'nir', 'scl']
|
||||
import os, hashlib
|
||||
cache_dir = "dataset_cache"
|
||||
os.makedirs(cache_dir, exist_ok=True)
|
||||
key_str = f"s2_{date_range}_{longtitude_range}_{latitude_range}"
|
||||
cache_key = hashlib.md5(key_str.encode()).hexdigest() + ".nc"
|
||||
cache_path = os.path.join(cache_dir, cache_key)
|
||||
|
||||
if os.path.exists(cache_path):
|
||||
print(f"✅ Loading cached S2 data from {cache_path}")
|
||||
return xr.open_dataset(cache_path, engine='netcdf4')
|
||||
|
||||
load_params = {
|
||||
'measurements': measurements, # Selected measurement or alias names
|
||||
'output_crs': native_crs, # Target EPSG code
|
||||
'resolution': (-10, 10), # Target resolution
|
||||
'group_by': 'solar_day', # Scene grouping
|
||||
'dask_chunks': {'x': 2048, 'y': 2048}, # Dask chunks
|
||||
}
|
||||
data = load_s2l2a_with_offset(
|
||||
dc,
|
||||
query | load_params # Combine the two dicts that contain our search and load parameters
|
||||
product = 's2_l2a'
|
||||
bbox = [longtitude_range[0], latitude_range[0], longtitude_range[1], latitude_range[1]]
|
||||
|
||||
import pystac_client
|
||||
import planetary_computer
|
||||
import odc.stac
|
||||
|
||||
catalog = pystac_client.Client.open(
|
||||
"https://planetarycomputer.microsoft.com/api/stac/v1",
|
||||
modifier=planetary_computer.sign_inplace,
|
||||
)
|
||||
search = catalog.search(
|
||||
collections=["sentinel-2-l2a"],
|
||||
bbox=bbox,
|
||||
datetime=f"{date_range[0]}/{date_range[1]}",
|
||||
)
|
||||
items = list(search.items())
|
||||
|
||||
data = odc.stac.load(
|
||||
items,
|
||||
bands=["red", "nir", "SCL"],
|
||||
bbox=bbox,
|
||||
crs="EPSG:32648",
|
||||
resolution=RESOLUTION,
|
||||
chunks={"x": 2048, "y": 2048, "time": 1},
|
||||
groupby="solar_day"
|
||||
)
|
||||
if "SCL" in data.data_vars:
|
||||
data = data.rename({"SCL": "scl"})
|
||||
|
||||
print(f"💾 Caching S2 data to {cache_path}")
|
||||
data = data.compute()
|
||||
data.to_netcdf(cache_path, engine='netcdf4')
|
||||
|
||||
return data
|
||||
|
||||
|
||||
def mask_clean(data):
|
||||
flag_name = 'scl'
|
||||
flag_desc = masking.describe_variable_flags(data[flag_name]) # Pandas dataframe
|
||||
display(flag_desc)
|
||||
display(flag_desc.loc['qa'].values[1])
|
||||
# Create a "data quality" Mask layer
|
||||
flags_def = flag_desc.loc['qa'].values[1]
|
||||
good_pixel_flags = [flags_def[str(i)] for i in [2, 4, 5, 6]] # To pass strings to enum_to_bool()
|
||||
|
||||
# enum_to_bool calculates the pixel-wise "or" of each set of pixels given by good_pixel_flags
|
||||
# 1 = good data
|
||||
# 0 = "bad" data
|
||||
good_pixel_mask = enum_to_bool(data[flag_name], good_pixel_flags)
|
||||
# For Sentinel-2 L2A SCL:
|
||||
# 2: Dark Area Pixels, 4: Vegetation, 5: Not Vegetated, 6: Water
|
||||
good_pixel_mask = data['scl'].isin([2, 4, 5, 6])
|
||||
data_layer_names = [x for x in data.data_vars if x != 'scl']
|
||||
# Apply good pixel mask to blue, green, red and nir.
|
||||
# Apply good pixel mask
|
||||
result = data[data_layer_names].where(good_pixel_mask).persist()
|
||||
return result
|
||||
|
||||
|
||||
def fill_nan(ndvi, time_split):
|
||||
if len(ndvi.time) == 0:
|
||||
return ndvi
|
||||
|
||||
# If the total time duration is less than 90 days, skip seasonal splitting
|
||||
try:
|
||||
total_days = (ndvi.time[-1] - ndvi.time[0]).dt.days.item()
|
||||
if total_days < 90:
|
||||
return ndvi.bfill(dim="time").ffill(dim="time")
|
||||
except Exception:
|
||||
pass
|
||||
|
||||
rs = []
|
||||
for times in time_split:
|
||||
tmp = ndvi.sel(time=times)
|
||||
fill_ds = tmp.sel(time=times).bfill(dim='time')
|
||||
fill_ds = fill_ds.sel(time=times).ffill(dim='time')
|
||||
rs.append(fill_ds)
|
||||
try:
|
||||
tmp = ndvi.sel(time=times)
|
||||
if len(tmp.time) == 0:
|
||||
continue
|
||||
fill_ds = tmp.bfill(dim='time').ffill(dim='time')
|
||||
rs.append(fill_ds)
|
||||
except Exception:
|
||||
continue
|
||||
|
||||
if len(rs) == 0:
|
||||
return ndvi.bfill(dim="time").ffill(dim="time")
|
||||
|
||||
merged_ndvi = xr.concat([i for i in rs], dim="time")
|
||||
fill_m = merged_ndvi.bfill(dim="time")
|
||||
fill_m = fill_m.ffill(dim="time")
|
||||
@@ -144,10 +182,68 @@ def load_train_data(train_path):
|
||||
return train
|
||||
|
||||
|
||||
def load_sen1(name_vh, name_vv):
|
||||
dsvv = rioxarray.open_rasterio(name_vv)
|
||||
dsvh = rioxarray.open_rasterio(name_vh)
|
||||
return dsvh, dsvv
|
||||
def load_sen1(bbox, time_range):
|
||||
import os, hashlib
|
||||
cache_dir = "dataset_cache"
|
||||
os.makedirs(cache_dir, exist_ok=True)
|
||||
key_str = f"s1_vh_vv_{bbox}_{time_range}"
|
||||
cache_key_vh = hashlib.md5((key_str + "vh").encode()).hexdigest() + ".nc"
|
||||
cache_key_vv = hashlib.md5((key_str + "vv").encode()).hexdigest() + ".nc"
|
||||
cache_path_vh = os.path.join(cache_dir, cache_key_vh)
|
||||
cache_path_vv = os.path.join(cache_dir, cache_key_vv)
|
||||
|
||||
if os.path.exists(cache_path_vh) and os.path.exists(cache_path_vv):
|
||||
print(f"✅ Loading cached S1 data from {cache_path_vh} and {cache_path_vv}")
|
||||
ds_vh = xr.open_dataset(cache_path_vh, engine='netcdf4')
|
||||
ds_vv = xr.open_dataset(cache_path_vv, engine='netcdf4')
|
||||
return ds_vh[list(ds_vh.data_vars)[0]], ds_vv[list(ds_vv.data_vars)[0]]
|
||||
|
||||
import pystac_client
|
||||
import planetary_computer
|
||||
import odc.stac
|
||||
|
||||
# Kết nối STAC Client
|
||||
catalog = pystac_client.Client.open(
|
||||
"https://planetarycomputer.microsoft.com/api/stac/v1",
|
||||
modifier=planetary_computer.sign_inplace,
|
||||
)
|
||||
|
||||
# Tìm kiếm Items
|
||||
search = catalog.search(
|
||||
collections=["sentinel-1-rtc"],
|
||||
bbox=bbox,
|
||||
datetime=time_range,
|
||||
)
|
||||
items = list(search.items())
|
||||
|
||||
# Tải dữ liệu thành xarray Dataset
|
||||
ds_s1 = odc.stac.load(
|
||||
items,
|
||||
bands=["vv", "vh"],
|
||||
bbox=bbox,
|
||||
crs="EPSG:32648",
|
||||
resolution=RESOLUTION,
|
||||
chunks={"x": 2048, "y": 2048, "time": 1}
|
||||
)
|
||||
|
||||
# Tính giá trị trung vị theo thời gian
|
||||
ds_median = ds_s1.median(dim="time").compute()
|
||||
vv = ds_median["vv"]
|
||||
vh = ds_median["vh"]
|
||||
|
||||
# Thêm chiều 'band' để giống hệt rioxarray
|
||||
vv = vv.expand_dims(dim="band")
|
||||
vh = vh.expand_dims(dim="band")
|
||||
|
||||
# Phục hồi metadata về toạ độ
|
||||
vv = vv.rio.write_crs("EPSG:32648")
|
||||
vh = vh.rio.write_crs("EPSG:32648")
|
||||
|
||||
print(f"💾 Caching S1 data to {cache_dir}")
|
||||
vh.to_netcdf(cache_path_vh, engine='netcdf4')
|
||||
vv.to_netcdf(cache_path_vv, engine='netcdf4')
|
||||
|
||||
return vh, vv
|
||||
|
||||
|
||||
def get_data_sen1_and_sen2(train, average_ndvi, dsvh, dsvv):
|
||||
@@ -192,7 +288,7 @@ def train_with_rf(X_train, X_val, y_train, y_val):
|
||||
# Takes 1-2 minutes to complete
|
||||
|
||||
# Tạo RandomForestClassifier mặc định để sử dụng làm mô hình ban đầu trong pipeline
|
||||
base_model = RandomForestClassifier(random_state=42, n_jobs=-1)
|
||||
base_model = XGBClassifier(tree_method="hist", device="cuda", random_state=42, n_jobs=-1)
|
||||
|
||||
# Tạo pipeline
|
||||
pipeline = Pipeline([
|
||||
@@ -204,7 +300,7 @@ def train_with_rf(X_train, X_val, y_train, y_val):
|
||||
param_grid = {
|
||||
'classifier__n_estimators': [100, 300, 500, 700, 1000],
|
||||
'classifier__max_depth': [6, 8, 10, 15, 20],
|
||||
'classifier__criterion': ['gini', 'entropy'],
|
||||
'classifier__learning_rate': [0.01, 0.1, 0.2],
|
||||
}
|
||||
|
||||
# Sử dụng GridSearchCV để tìm bộ tham số tốt nhất
|
||||
@@ -224,15 +320,53 @@ def train_with_rf(X_train, X_val, y_train, y_val):
|
||||
return grid_search
|
||||
|
||||
|
||||
def save_model(name_file, grid_search):
|
||||
def save_model(name_file, model, metadata=None, label_encoder=None):
|
||||
"""
|
||||
Save model với metadata để tương thích với ModelManager
|
||||
|
||||
Args:
|
||||
name_file: Tên file model
|
||||
model: Model object
|
||||
metadata: Dict chứa thông tin về model (optional)
|
||||
label_encoder: Label encoder (optional)
|
||||
"""
|
||||
from model_manager import get_model_manager
|
||||
|
||||
dir_save_model = "model_train"
|
||||
if not os.path.exists(dir_save_model):
|
||||
os.mkdir(dir_save_model)
|
||||
joblib.dump(grid_search, os.path.join(dir_save_model, name_file))
|
||||
print("Done!")
|
||||
|
||||
# Nếu có metadata, sử dụng ModelManager
|
||||
if metadata is not None:
|
||||
model_manager = get_model_manager()
|
||||
model_manager.save_model(
|
||||
model=model,
|
||||
metadata=metadata,
|
||||
model_filename=name_file,
|
||||
label_encoder=label_encoder
|
||||
)
|
||||
else:
|
||||
# Legacy mode: save trực tiếp (backward compatibility)
|
||||
model_data = {
|
||||
'model': model,
|
||||
'label_encoder': label_encoder
|
||||
} if label_encoder is not None else model
|
||||
|
||||
joblib.dump(model_data, os.path.join(dir_save_model, name_file))
|
||||
|
||||
print(f"✅ Model saved: {name_file}")
|
||||
if metadata:
|
||||
print(f" - Type: {metadata.get('model_type', 'N/A')}")
|
||||
print(f" - Features: {metadata.get('n_features', 'N/A')}")
|
||||
print(f" - Accuracy: {metadata.get('test_accuracy', 'N/A')}")
|
||||
|
||||
|
||||
|
||||
def predict(model, data_crs, ndvi, vh, vv):
|
||||
# Unpack model if it is wrapped in a dictionary (from ModelManager)
|
||||
if isinstance(model, dict) and 'model' in model:
|
||||
model = model['model']
|
||||
|
||||
data_predict = []
|
||||
for i in range(ndvi.shape[1]):
|
||||
ndvi_tmp = ndvi.isel(y=i).values
|
||||
@@ -326,25 +460,59 @@ def save_result(result, HT_MAP):
|
||||
# plt.show()
|
||||
|
||||
def load_data_sen1(dc, date_range, coordinates):
|
||||
import os, hashlib
|
||||
longtitude_range, latitude_range = coordinates
|
||||
data_sen1 = dc.load(
|
||||
product="sentinel1_grd_gamma0_10m",
|
||||
x=longtitude_range,
|
||||
y=latitude_range,
|
||||
time=date_range,
|
||||
measurements=["vv", "vh"],
|
||||
output_crs="EPSG:32648",
|
||||
resolution=(-10,10),
|
||||
dask_chunks={"x":2048, "y":2048},
|
||||
skip_broken_datasets=True,
|
||||
group_by='solar_day'
|
||||
bbox = [longtitude_range[0], latitude_range[0], longtitude_range[1], latitude_range[1]]
|
||||
|
||||
cache_dir = "dataset_cache"
|
||||
os.makedirs(cache_dir, exist_ok=True)
|
||||
key_str = f"data_sen1_{date_range}_{bbox}"
|
||||
cache_key_vh = hashlib.md5((key_str + "vh").encode()).hexdigest() + ".nc"
|
||||
cache_key_vv = hashlib.md5((key_str + "vv").encode()).hexdigest() + ".nc"
|
||||
cache_path_vh = os.path.join(cache_dir, cache_key_vh)
|
||||
cache_path_vv = os.path.join(cache_dir, cache_key_vv)
|
||||
|
||||
if os.path.exists(cache_path_vh) and os.path.exists(cache_path_vv):
|
||||
print(f"✅ Loading cached S1 (coord) data")
|
||||
ds_vh = xr.open_dataset(cache_path_vh, engine='netcdf4')
|
||||
ds_vv = xr.open_dataset(cache_path_vv, engine='netcdf4')
|
||||
var_vh = [v for v in ds_vh.data_vars if v != 'spatial_ref'][0]
|
||||
var_vv = [v for v in ds_vv.data_vars if v != 'spatial_ref'][0]
|
||||
return ds_vh[var_vh], ds_vv[var_vv]
|
||||
|
||||
import pystac_client
|
||||
import planetary_computer
|
||||
import odc.stac
|
||||
|
||||
catalog = pystac_client.Client.open(
|
||||
"https://planetarycomputer.microsoft.com/api/stac/v1",
|
||||
modifier=planetary_computer.sign_inplace,
|
||||
)
|
||||
search = catalog.search(
|
||||
collections=["sentinel-1-rtc"],
|
||||
bbox=bbox,
|
||||
datetime=f"{date_range[0]}/{date_range[1]}",
|
||||
)
|
||||
items = list(search.items())
|
||||
|
||||
data_sen1 = odc.stac.load(
|
||||
items,
|
||||
bands=["vv", "vh"],
|
||||
bbox=bbox,
|
||||
crs="EPSG:32648",
|
||||
resolution=RESOLUTION,
|
||||
chunks={"x": 2048, "y": 2048, "time": 1},
|
||||
groupby="solar_day"
|
||||
)
|
||||
|
||||
notebook_utils.heading(notebook_utils.xarray_object_size(data_sen1))
|
||||
display(data_sen1)
|
||||
data_sen1 = data_sen1.compute()
|
||||
dsvh = data_sen1.vh
|
||||
dsvv = data_sen1.vv
|
||||
|
||||
print(f"💾 Caching S1 (coord) data")
|
||||
dsvh.to_netcdf(cache_path_vh, engine='netcdf4')
|
||||
dsvv.to_netcdf(cache_path_vv, engine='netcdf4')
|
||||
|
||||
return dsvh, dsvv
|
||||
|
||||
def calculate_average(data, time_pattern='1M'):
|
||||
@@ -352,54 +520,66 @@ def calculate_average(data, time_pattern='1M'):
|
||||
|
||||
|
||||
def load_data_sen2(dc, date_range, coordinates):
|
||||
import os, hashlib
|
||||
longtitude_range, latitude_range = coordinates
|
||||
product = 's2_l2a'
|
||||
query = {
|
||||
'product': product, # Product name
|
||||
'x': longtitude_range, # "x" axis bounds
|
||||
'y': latitude_range, # "y" axis bounds
|
||||
'time': date_range, # Any parsable date strings
|
||||
}
|
||||
native_crs = notebook_utils.mostcommon_crs(dc, query)
|
||||
print(f'Most common native CRS: {native_crs}')
|
||||
bbox = [longtitude_range[0], latitude_range[0], longtitude_range[1], latitude_range[1]]
|
||||
|
||||
# measurements = ['red','green', 'blue', 'nir', 'scl']
|
||||
measurements = ['red', 'nir', 'scl']
|
||||
|
||||
load_params = {
|
||||
'measurements': measurements, # Selected measurement or alias names
|
||||
'output_crs': native_crs, # Target EPSG code
|
||||
'resolution': (-10, 10), # Target resolution
|
||||
'group_by': 'solar_day', # Scene grouping
|
||||
'dask_chunks': {'x': 2048, 'y': 2048}, # Dask chunks
|
||||
}
|
||||
data = load_s2l2a_with_offset(
|
||||
dc,
|
||||
query | load_params # Combine the two dicts that contain our search and load parameters
|
||||
cache_dir = "dataset_cache"
|
||||
os.makedirs(cache_dir, exist_ok=True)
|
||||
key_str = f"data_sen2_{date_range}_{bbox}"
|
||||
cache_key = hashlib.md5(key_str.encode()).hexdigest() + ".nc"
|
||||
cache_path = os.path.join(cache_dir, cache_key)
|
||||
|
||||
if os.path.exists(cache_path):
|
||||
print(f"✅ Loading cached S2 (coord) data from {cache_path}")
|
||||
return xr.open_dataset(cache_path, engine='netcdf4')
|
||||
|
||||
import pystac_client
|
||||
import planetary_computer
|
||||
import odc.stac
|
||||
|
||||
catalog = pystac_client.Client.open(
|
||||
"https://planetarycomputer.microsoft.com/api/stac/v1",
|
||||
modifier=planetary_computer.sign_inplace,
|
||||
)
|
||||
search = catalog.search(
|
||||
collections=["sentinel-2-l2a"],
|
||||
bbox=bbox,
|
||||
datetime=f"{date_range[0]}/{date_range[1]}",
|
||||
)
|
||||
items = list(search.items())
|
||||
|
||||
data = odc.stac.load(
|
||||
items,
|
||||
bands=["red", "nir", "SCL"],
|
||||
bbox=bbox,
|
||||
crs="EPSG:32648",
|
||||
resolution=RESOLUTION,
|
||||
chunks={"x": 2048, "y": 2048, "time": 1},
|
||||
groupby="solar_day"
|
||||
)
|
||||
if "SCL" in data.data_vars:
|
||||
data = data.rename({"SCL": "scl"})
|
||||
|
||||
data = data.compute()
|
||||
print(f"💾 Caching S2 (coord) data to {cache_path}")
|
||||
data.to_netcdf(cache_path, engine='netcdf4')
|
||||
|
||||
return data
|
||||
|
||||
def mask_cloud(data):
|
||||
flag_name = 'scl'
|
||||
flag_desc = masking.describe_variable_flags(data[flag_name]) # Pandas dataframe
|
||||
display(flag_desc.loc['qa'].values[1])
|
||||
# Create a "data quality" Mask layer
|
||||
flags_def = flag_desc.loc['qa'].values[1]
|
||||
good_pixel_flags = [flags_def[str(i)] for i in [2, 4, 5, 6]] # To pass strings to enum_to_bool()
|
||||
|
||||
# enum_to_bool calculates the pixel-wise "or" of each set of pixels given by good_pixel_flags
|
||||
# 1 = good data
|
||||
# 0 = "bad" data
|
||||
good_pixel_mask = enum_to_bool(data[flag_name], good_pixel_flags)
|
||||
# For Sentinel-2 L2A SCL:
|
||||
# 2: Dark Area Pixels, 4: Vegetation, 5: Not Vegetated, 6: Water
|
||||
good_pixel_mask = data['scl'].isin([2, 4, 5, 6])
|
||||
data_layer_names = [x for x in data.data_vars if x != 'scl']
|
||||
# Apply good pixel mask to blue, green, red and nir.
|
||||
# Apply good pixel mask
|
||||
result = data[data_layer_names].where(good_pixel_mask).persist()
|
||||
return result
|
||||
|
||||
def find_best_model(dataset):
|
||||
X_train, X_val, y_train, y_val = dataset
|
||||
# Tạo RandomForestClassifier mặc định để sử dụng làm mô hình ban đầu trong pipeline
|
||||
base_model = RandomForestClassifier(random_state=42, n_jobs=-1)
|
||||
base_model = XGBClassifier(tree_method="hist", device="cuda", random_state=42, n_jobs=-1)
|
||||
|
||||
# Tạo pipeline
|
||||
pipeline = Pipeline([
|
||||
@@ -411,7 +591,7 @@ def find_best_model(dataset):
|
||||
param_grid = {
|
||||
'classifier__n_estimators': [100, 300, 500, 700, 1000],
|
||||
'classifier__max_depth': [6, 8, 10, 15, 20],
|
||||
'classifier__criterion': ['gini', 'entropy'],
|
||||
'classifier__learning_rate': [0.01, 0.1, 0.2],
|
||||
}
|
||||
|
||||
# Sử dụng GridSearchCV để tìm bộ tham số tốt nhất
|
||||
File diff suppressed because one or more lines are too long
@@ -0,0 +1,231 @@
|
||||
import re
|
||||
import os
|
||||
|
||||
with open('/home/x79/remote-sensing/new_import_ODC.py', 'r', encoding='utf-8') as f:
|
||||
content = f.read()
|
||||
|
||||
# 1. load_data
|
||||
load_data_replacement = """def load_data(dc, date_range, longtitude_range, latitude_range):
|
||||
import os, hashlib
|
||||
cache_dir = "dataset_cache"
|
||||
os.makedirs(cache_dir, exist_ok=True)
|
||||
key_str = f"s2_{date_range}_{longtitude_range}_{latitude_range}"
|
||||
cache_key = hashlib.md5(key_str.encode()).hexdigest() + ".nc"
|
||||
cache_path = os.path.join(cache_dir, cache_key)
|
||||
|
||||
if os.path.exists(cache_path):
|
||||
print(f"✅ Loading cached S2 data from {cache_path}")
|
||||
return xr.open_dataset(cache_path)
|
||||
|
||||
product = 's2_l2a'
|
||||
bbox = [longtitude_range[0], latitude_range[0], longtitude_range[1], latitude_range[1]]
|
||||
|
||||
import pystac_client
|
||||
import planetary_computer
|
||||
import odc.stac
|
||||
|
||||
catalog = pystac_client.Client.open(
|
||||
"https://planetarycomputer.microsoft.com/api/stac/v1",
|
||||
modifier=planetary_computer.sign_inplace,
|
||||
)
|
||||
search = catalog.search(
|
||||
collections=["sentinel-2-l2a"],
|
||||
bbox=bbox,
|
||||
datetime=f"{date_range[0]}/{date_range[1]}",
|
||||
)
|
||||
items = list(search.items())
|
||||
|
||||
data = odc.stac.load(
|
||||
items,
|
||||
bands=["red", "nir", "SCL"],
|
||||
bbox=bbox,
|
||||
crs="EPSG:32648",
|
||||
resolution=RESOLUTION,
|
||||
chunks={"x": 2048, "y": 2048, "time": 1},
|
||||
groupby="solar_day"
|
||||
)
|
||||
if "SCL" in data.data_vars:
|
||||
data = data.rename({"SCL": "scl"})
|
||||
|
||||
print(f"💾 Caching S2 data to {cache_path}")
|
||||
data = data.compute()
|
||||
data.to_netcdf(cache_path)
|
||||
|
||||
return data"""
|
||||
content = re.sub(r'def load_data\(dc, date_range, longtitude_range, latitude_range\):.*?return data', load_data_replacement, content, flags=re.DOTALL)
|
||||
|
||||
|
||||
# 2. load_sen1
|
||||
load_sen1_replacement = """def load_sen1(bbox, time_range):
|
||||
import os, hashlib
|
||||
cache_dir = "dataset_cache"
|
||||
os.makedirs(cache_dir, exist_ok=True)
|
||||
key_str = f"s1_vh_vv_{bbox}_{time_range}"
|
||||
cache_key_vh = hashlib.md5((key_str + "vh").encode()).hexdigest() + ".nc"
|
||||
cache_key_vv = hashlib.md5((key_str + "vv").encode()).hexdigest() + ".nc"
|
||||
cache_path_vh = os.path.join(cache_dir, cache_key_vh)
|
||||
cache_path_vv = os.path.join(cache_dir, cache_key_vv)
|
||||
|
||||
if os.path.exists(cache_path_vh) and os.path.exists(cache_path_vv):
|
||||
print(f"✅ Loading cached S1 data from {cache_path_vh} and {cache_path_vv}")
|
||||
return xr.open_dataarray(cache_path_vh), xr.open_dataarray(cache_path_vv)
|
||||
|
||||
import pystac_client
|
||||
import planetary_computer
|
||||
import odc.stac
|
||||
|
||||
# Kết nối STAC Client
|
||||
catalog = pystac_client.Client.open(
|
||||
"https://planetarycomputer.microsoft.com/api/stac/v1",
|
||||
modifier=planetary_computer.sign_inplace,
|
||||
)
|
||||
|
||||
# Tìm kiếm Items
|
||||
search = catalog.search(
|
||||
collections=["sentinel-1-rtc"],
|
||||
bbox=bbox,
|
||||
datetime=time_range,
|
||||
)
|
||||
items = list(search.items())
|
||||
|
||||
# Tải dữ liệu thành xarray Dataset
|
||||
ds_s1 = odc.stac.load(
|
||||
items,
|
||||
bands=["vv", "vh"],
|
||||
bbox=bbox,
|
||||
crs="EPSG:32648",
|
||||
resolution=RESOLUTION,
|
||||
chunks={"x": 2048, "y": 2048, "time": 1}
|
||||
)
|
||||
|
||||
# Tính giá trị trung vị theo thời gian
|
||||
ds_median = ds_s1.median(dim="time").compute()
|
||||
vv = ds_median["vv"]
|
||||
vh = ds_median["vh"]
|
||||
|
||||
# Thêm chiều 'band' để giống hệt rioxarray
|
||||
vv = vv.expand_dims(dim="band")
|
||||
vh = vh.expand_dims(dim="band")
|
||||
|
||||
# Phục hồi metadata về toạ độ
|
||||
vv = vv.rio.write_crs("EPSG:32648")
|
||||
vh = vh.rio.write_crs("EPSG:32648")
|
||||
|
||||
print(f"💾 Caching S1 data to {cache_dir}")
|
||||
vh.to_netcdf(cache_path_vh)
|
||||
vv.to_netcdf(cache_path_vv)
|
||||
|
||||
return vh, vv"""
|
||||
content = re.sub(r'def load_sen1\(bbox, time_range\):.*?return vh, vv', load_sen1_replacement, content, flags=re.DOTALL)
|
||||
|
||||
|
||||
# 3. load_data_sen1
|
||||
load_data_sen1_replacement = """def load_data_sen1(dc, date_range, coordinates):
|
||||
import os, hashlib
|
||||
longtitude_range, latitude_range = coordinates
|
||||
bbox = [longtitude_range[0], latitude_range[0], longtitude_range[1], latitude_range[1]]
|
||||
|
||||
cache_dir = "dataset_cache"
|
||||
os.makedirs(cache_dir, exist_ok=True)
|
||||
key_str = f"data_sen1_{date_range}_{bbox}"
|
||||
cache_key_vh = hashlib.md5((key_str + "vh").encode()).hexdigest() + ".nc"
|
||||
cache_key_vv = hashlib.md5((key_str + "vv").encode()).hexdigest() + ".nc"
|
||||
cache_path_vh = os.path.join(cache_dir, cache_key_vh)
|
||||
cache_path_vv = os.path.join(cache_dir, cache_key_vv)
|
||||
|
||||
if os.path.exists(cache_path_vh) and os.path.exists(cache_path_vv):
|
||||
print(f"✅ Loading cached S1 (coord) data")
|
||||
return xr.open_dataarray(cache_path_vh), xr.open_dataarray(cache_path_vv)
|
||||
|
||||
import pystac_client
|
||||
import planetary_computer
|
||||
import odc.stac
|
||||
|
||||
catalog = pystac_client.Client.open(
|
||||
"https://planetarycomputer.microsoft.com/api/stac/v1",
|
||||
modifier=planetary_computer.sign_inplace,
|
||||
)
|
||||
search = catalog.search(
|
||||
collections=["sentinel-1-rtc"],
|
||||
bbox=bbox,
|
||||
datetime=f"{date_range[0]}/{date_range[1]}",
|
||||
)
|
||||
items = list(search.items())
|
||||
|
||||
data_sen1 = odc.stac.load(
|
||||
items,
|
||||
bands=["vv", "vh"],
|
||||
bbox=bbox,
|
||||
crs="EPSG:32648",
|
||||
resolution=RESOLUTION,
|
||||
chunks={"x": 2048, "y": 2048, "time": 1},
|
||||
groupby="solar_day"
|
||||
)
|
||||
|
||||
data_sen1 = data_sen1.compute()
|
||||
dsvh = data_sen1.vh
|
||||
dsvv = data_sen1.vv
|
||||
|
||||
print(f"💾 Caching S1 (coord) data")
|
||||
dsvh.to_netcdf(cache_path_vh)
|
||||
dsvv.to_netcdf(cache_path_vv)
|
||||
|
||||
return dsvh, dsvv"""
|
||||
content = re.sub(r'def load_data_sen1\(dc, date_range, coordinates\):.*?return dsvh, dsvv', load_data_sen1_replacement, content, flags=re.DOTALL)
|
||||
|
||||
|
||||
# 4. load_data_sen2
|
||||
load_data_sen2_replacement = """def load_data_sen2(dc, date_range, coordinates):
|
||||
import os, hashlib
|
||||
longtitude_range, latitude_range = coordinates
|
||||
bbox = [longtitude_range[0], latitude_range[0], longtitude_range[1], latitude_range[1]]
|
||||
|
||||
cache_dir = "dataset_cache"
|
||||
os.makedirs(cache_dir, exist_ok=True)
|
||||
key_str = f"data_sen2_{date_range}_{bbox}"
|
||||
cache_key = hashlib.md5(key_str.encode()).hexdigest() + ".nc"
|
||||
cache_path = os.path.join(cache_dir, cache_key)
|
||||
|
||||
if os.path.exists(cache_path):
|
||||
print(f"✅ Loading cached S2 (coord) data from {cache_path}")
|
||||
return xr.open_dataset(cache_path)
|
||||
|
||||
import pystac_client
|
||||
import planetary_computer
|
||||
import odc.stac
|
||||
|
||||
catalog = pystac_client.Client.open(
|
||||
"https://planetarycomputer.microsoft.com/api/stac/v1",
|
||||
modifier=planetary_computer.sign_inplace,
|
||||
)
|
||||
search = catalog.search(
|
||||
collections=["sentinel-2-l2a"],
|
||||
bbox=bbox,
|
||||
datetime=f"{date_range[0]}/{date_range[1]}",
|
||||
)
|
||||
items = list(search.items())
|
||||
|
||||
data = odc.stac.load(
|
||||
items,
|
||||
bands=["red", "nir", "SCL"],
|
||||
bbox=bbox,
|
||||
crs="EPSG:32648",
|
||||
resolution=RESOLUTION,
|
||||
chunks={"x": 2048, "y": 2048, "time": 1},
|
||||
groupby="solar_day"
|
||||
)
|
||||
if "SCL" in data.data_vars:
|
||||
data = data.rename({"SCL": "scl"})
|
||||
|
||||
data = data.compute()
|
||||
print(f"💾 Caching S2 (coord) data to {cache_path}")
|
||||
data.to_netcdf(cache_path)
|
||||
|
||||
return data"""
|
||||
content = re.sub(r'def load_data_sen2\(dc, date_range, coordinates\):.*?return data', load_data_sen2_replacement, content, flags=re.DOTALL)
|
||||
|
||||
|
||||
with open('/home/x79/remote-sensing/new_import_ODC.py', 'w', encoding='utf-8') as f:
|
||||
f.write(content)
|
||||
|
||||
print("Patching successful.")
|
||||
@@ -0,0 +1,29 @@
|
||||
import json
|
||||
import glob
|
||||
|
||||
def fix_load_sen1(file_path):
|
||||
with open(file_path, 'r', encoding='utf-8') as f:
|
||||
nb = json.load(f)
|
||||
|
||||
changed = False
|
||||
for cell in nb.get('cells', []):
|
||||
if cell.get('cell_type') == 'code':
|
||||
source = cell.get('source', [])
|
||||
for i, line in enumerate(source):
|
||||
if 'load_sen1(name_vh, name_vv)' in line:
|
||||
indent = line[:len(line) - len(line.lstrip())]
|
||||
replacement = (
|
||||
f"{indent}bbox = [longtitude_range[0], latitude_range[0], longtitude_range[1], latitude_range[1]]\n"
|
||||
f"{indent}time_range = f'{{date_range[0]}}/{{date_range[1]}}'\n"
|
||||
f"{indent}{line.lstrip().replace('load_sen1(name_vh, name_vv)', 'load_sen1(bbox, time_range)')}"
|
||||
)
|
||||
source[i] = replacement
|
||||
changed = True
|
||||
|
||||
if changed:
|
||||
with open(file_path, 'w', encoding='utf-8') as f:
|
||||
json.dump(nb, f, indent=1)
|
||||
print(f"Patched load_sen1 in {file_path}")
|
||||
|
||||
for nb in glob.glob("*.ipynb"):
|
||||
fix_load_sen1(nb)
|
||||
@@ -0,0 +1,43 @@
|
||||
import json
|
||||
import glob
|
||||
|
||||
def patch_notebook(file_path):
|
||||
with open(file_path, 'r', encoding='utf-8') as f:
|
||||
nb = json.load(f)
|
||||
|
||||
changed = False
|
||||
for cell in nb.get('cells', []):
|
||||
if cell.get('cell_type') == 'code':
|
||||
source = cell.get('source', [])
|
||||
|
||||
# Check if this cell should be fully commented out
|
||||
full_source = ''.join(source)
|
||||
if 'dc.load(' in full_source or 'ds.vv' in full_source:
|
||||
for i in range(len(source)):
|
||||
if not source[i].startswith('#'):
|
||||
source[i] = '# ' + source[i]
|
||||
changed = True
|
||||
continue
|
||||
|
||||
# Otherwise, do line-by-line replacements
|
||||
for i, line in enumerate(source):
|
||||
if 'ST_training data_updated_1130points.shp' in line:
|
||||
source[i] = line.replace('ST_training data_updated_1130points.shp', 'ST_training_data_updated_1130points.shp')
|
||||
changed = True
|
||||
if 'from new_import import *' in line:
|
||||
source[i] = line.replace('from new_import import *', 'from new_import_ODC import *')
|
||||
changed = True
|
||||
if 'dc = datacube.Datacube()' in line:
|
||||
source[i] = line.replace('dc = datacube.Datacube()', 'dc = None')
|
||||
changed = True
|
||||
if 'load_data(dc,' in line:
|
||||
source[i] = line.replace('load_data(dc,', 'load_data(None,')
|
||||
changed = True
|
||||
|
||||
if changed:
|
||||
with open(file_path, 'w', encoding='utf-8') as f:
|
||||
json.dump(nb, f, indent=1)
|
||||
print(f"Patched {file_path}")
|
||||
|
||||
for nb in glob.glob("*.ipynb"):
|
||||
patch_notebook(nb)
|
||||
@@ -0,0 +1,75 @@
|
||||
import json
|
||||
import glob
|
||||
import re
|
||||
|
||||
def patch_python_script(filepath):
|
||||
try:
|
||||
with open(filepath, 'r', encoding='utf-8') as f:
|
||||
content = f.read()
|
||||
|
||||
original_content = content
|
||||
|
||||
# Replace imports
|
||||
content = re.sub(r'from sklearn\.ensemble import RandomForestClassifier',
|
||||
'from xgboost import XGBClassifier', content)
|
||||
|
||||
# Replace the model instantiations (for 01.train_ODC.py)
|
||||
rf_pattern = re.compile(r'model\s*=\s*RandomForestClassifier\([^)]+\)', re.DOTALL)
|
||||
xgb_replacement = """model = XGBClassifier(
|
||||
n_estimators=200,
|
||||
max_depth=30,
|
||||
tree_method="hist",
|
||||
device="cuda",
|
||||
random_state=42,
|
||||
n_jobs=-1,
|
||||
verbosity=1
|
||||
)"""
|
||||
|
||||
content = rf_pattern.sub(xgb_replacement, content)
|
||||
|
||||
if content != original_content:
|
||||
with open(filepath, 'w', encoding='utf-8') as f:
|
||||
f.write(content)
|
||||
print(f"Patched {filepath}")
|
||||
except Exception as e:
|
||||
print(f"Error patching {filepath}: {e}")
|
||||
|
||||
def patch_notebook(filepath):
|
||||
try:
|
||||
with open(filepath, 'r', encoding='utf-8') as f:
|
||||
nb = json.load(f)
|
||||
|
||||
changed = False
|
||||
import_pattern = re.compile(r'from\s+sklearn\.ensemble\s+import\s+RandomForestClassifier')
|
||||
inst_pattern = re.compile(r'RandomForestClassifier\([^)]*\)')
|
||||
|
||||
for cell in nb.get('cells', []):
|
||||
if cell.get('cell_type') == 'code':
|
||||
source = cell.get('source', [])
|
||||
for i in range(len(source)):
|
||||
if import_pattern.search(source[i]):
|
||||
source[i] = import_pattern.sub('from xgboost import XGBClassifier', source[i])
|
||||
changed = True
|
||||
|
||||
if inst_pattern.search(source[i]):
|
||||
source[i] = inst_pattern.sub("XGBClassifier(tree_method='hist', device='cuda', random_state=42, n_jobs=-1)", source[i])
|
||||
changed = True
|
||||
|
||||
if "'classifier__criterion': ['gini', 'entropy']" in source[i]:
|
||||
source[i] = source[i].replace("'classifier__criterion': ['gini', 'entropy']",
|
||||
"'classifier__learning_rate': [0.01, 0.1, 0.2]")
|
||||
changed = True
|
||||
|
||||
if changed:
|
||||
with open(filepath, 'w', encoding='utf-8') as f:
|
||||
json.dump(nb, f, indent=1)
|
||||
print(f"Patched {filepath}")
|
||||
except Exception as e:
|
||||
print(f"Error patching {filepath}: {e}")
|
||||
|
||||
if __name__ == "__main__":
|
||||
patch_python_script("01.train_ODC.py")
|
||||
patch_python_script("new_train.py")
|
||||
|
||||
for nb in glob.glob("*.ipynb"):
|
||||
patch_notebook(nb)
|
||||
@@ -1132,7 +1132,7 @@
|
||||
"source": [
|
||||
"%%time\n",
|
||||
"%matplotlib inline\n",
|
||||
"from new_import import *"
|
||||
"from new_import_ODC import *"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -1216,7 +1216,7 @@
|
||||
"%%time\n",
|
||||
"# Dask gateway\n",
|
||||
"cluster, client = notebook_utils.initialize_dask(use_gateway=True, workers=(1,4))\n",
|
||||
"dc = datacube.Datacube()\n",
|
||||
"dc = None\n",
|
||||
"\n",
|
||||
"# Configure s3 access\n",
|
||||
"configure_s3_access(aws_unsigned=False, requester_pays=True, client=client)\n",
|
||||
@@ -1233,11 +1233,11 @@
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"## cấu hình thời gian lấy ảnh và tọa độ\n",
|
||||
"# date_range = ('2022-09-01', '2023-10-01')\n",
|
||||
"## c\u1ea5u h\u00ecnh th\u1eddi gian l\u1ea5y \u1ea3nh v\u00e0 t\u1ecda \u0111\u1ed9\n",
|
||||
"# date_range = ('2022-09-01', '2022-10-01')\n",
|
||||
"# longtitude_range = (105.86575, 105.94120)\n",
|
||||
"# latitude_range = (9.65070, 9.69850)\n",
|
||||
"date_range = ('2022-09-01', '2023-10-01')\n",
|
||||
"date_range = ('2022-09-01', '2022-10-01')\n",
|
||||
"longtitude_range = (105.5, 106.4)\n",
|
||||
"latitude_range = (9.2, 10.0) "
|
||||
]
|
||||
@@ -1396,7 +1396,7 @@
|
||||
"\n",
|
||||
".xr-section-summary-in + label:before {\n",
|
||||
" display: inline-block;\n",
|
||||
" content: '►';\n",
|
||||
" content: '\u25ba';\n",
|
||||
" font-size: 11px;\n",
|
||||
" width: 15px;\n",
|
||||
" text-align: center;\n",
|
||||
@@ -1407,7 +1407,7 @@
|
||||
"}\n",
|
||||
"\n",
|
||||
".xr-section-summary-in:checked + label:before {\n",
|
||||
" content: '▼';\n",
|
||||
" content: '\u25bc';\n",
|
||||
"}\n",
|
||||
"\n",
|
||||
".xr-section-summary-in:checked + label > span {\n",
|
||||
@@ -2424,8 +2424,8 @@
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"## truy vấn ảnh vệ tinh sen2\n",
|
||||
"data = load_data(dc, date_range, longtitude_range, latitude_range)\n",
|
||||
"## truy v\u1ea5n \u1ea3nh v\u1ec7 tinh sen2\n",
|
||||
"data = load_data(None, date_range, longtitude_range, latitude_range)\n",
|
||||
"notebook_utils.heading(notebook_utils.xarray_object_size(data))\n",
|
||||
"display(data)"
|
||||
]
|
||||
@@ -2440,10 +2440,10 @@
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"# Specify the start and end times \n",
|
||||
"min_date = '2022-09-01' # Thời gian bắt đầu lấy data cho quá trình train\n",
|
||||
"max_date = '2023-10-01' # Thời gian kết thúc lấy data cho quá trình train\n",
|
||||
"min_date = '2022-09-01' # Th\u1eddi gian b\u1eaft \u0111\u1ea7u l\u1ea5y data cho qu\u00e1 tr\u00ecnh train\n",
|
||||
"max_date = '2022-10-01' # Th\u1eddi gian k\u1ebft th\u00fac l\u1ea5y data cho qu\u00e1 tr\u00ecnh train\n",
|
||||
"# Just do 1 month for testing\n",
|
||||
"# max_date = '2022-10-01' # Thời gian kết thúc lấy data cho quá trình train\n",
|
||||
"# max_date = '2022-10-01' # Th\u1eddi gian k\u1ebft th\u00fac l\u1ea5y data cho qu\u00e1 tr\u00ecnh train\n",
|
||||
"\n",
|
||||
"# Specify a spatail region to search using latitude/longitude cooridinates\n",
|
||||
"min_longitude, max_longitude = (105.5, 106.4)\n",
|
||||
@@ -2657,7 +2657,7 @@
|
||||
"\n",
|
||||
".xr-section-summary-in + label:before {\n",
|
||||
" display: inline-block;\n",
|
||||
" content: '►';\n",
|
||||
" content: '\u25ba';\n",
|
||||
" font-size: 11px;\n",
|
||||
" width: 15px;\n",
|
||||
" text-align: center;\n",
|
||||
@@ -2668,7 +2668,7 @@
|
||||
"}\n",
|
||||
"\n",
|
||||
".xr-section-summary-in:checked + label:before {\n",
|
||||
" content: '▼';\n",
|
||||
" content: '\u25bc';\n",
|
||||
"}\n",
|
||||
"\n",
|
||||
".xr-section-summary-in:checked + label > span {\n",
|
||||
@@ -3423,23 +3423,23 @@
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"CPU times: user 1.57 s, sys: 177 µs, total: 1.57 s\n",
|
||||
"CPU times: user 1.57 s, sys: 177 \u00b5s, total: 1.57 s\n",
|
||||
"Wall time: 1.66 s\n"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"%%time\n",
|
||||
"# %%time\n",
|
||||
"# The replacement \"dc.load()\" function for this product\n",
|
||||
"data = load_s2l2a_with_offset(\n",
|
||||
" dc,\n",
|
||||
" query | load_params # Combine the two dicts that contain our search and load parameters\n",
|
||||
")\n",
|
||||
"\n",
|
||||
"# data = load_s2l2a_with_offset(\n",
|
||||
"# dc,\n",
|
||||
"# query | load_params # Combine the two dicts that contain our search and load parameters\n",
|
||||
"# )\n",
|
||||
"# \n",
|
||||
"# This line prints the total size of the dataset hat was loaded\n",
|
||||
"notebook_utils.heading(notebook_utils.xarray_object_size(data))\n",
|
||||
"\n",
|
||||
"display(data)"
|
||||
"# notebook_utils.heading(notebook_utils.xarray_object_size(data))\n",
|
||||
"# \n",
|
||||
"# display(data)"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -3546,9 +3546,9 @@
|
||||
],
|
||||
"source": [
|
||||
"# %%time\n",
|
||||
"# # Tiến hành loại bỏ các vị trí bị mây ảnh hưởng\n",
|
||||
"# # Ti\u1ebfn h\u00e0nh lo\u1ea1i b\u1ecf c\u00e1c v\u1ecb tr\u00ed b\u1ecb m\u00e2y \u1ea3nh h\u01b0\u1edfng\n",
|
||||
"# result = mask_clean(data)\n",
|
||||
"# progress(result)"
|
||||
"# # progress(result)"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -3684,7 +3684,7 @@
|
||||
"\n",
|
||||
".xr-section-summary-in + label:before {\n",
|
||||
" display: inline-block;\n",
|
||||
" content: '►';\n",
|
||||
" content: '\u25ba';\n",
|
||||
" font-size: 11px;\n",
|
||||
" width: 15px;\n",
|
||||
" text-align: center;\n",
|
||||
@@ -3695,7 +3695,7 @@
|
||||
"}\n",
|
||||
"\n",
|
||||
".xr-section-summary-in:checked + label:before {\n",
|
||||
" content: '▼';\n",
|
||||
" content: '\u25bc';\n",
|
||||
"}\n",
|
||||
"\n",
|
||||
".xr-section-summary-in:checked + label > span {\n",
|
||||
@@ -4174,7 +4174,7 @@
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"# Tiến hành tính toán NDVI\n",
|
||||
"# Ti\u1ebfn h\u00e0nh t\u00ednh to\u00e1n NDVI\n",
|
||||
"ds1 = calculate_indices(result, index='NDVI', satellite_mission='s2')\n",
|
||||
"ndvi = ds1[\"NDVI\"]\n",
|
||||
"display(ndvi)"
|
||||
@@ -4213,9 +4213,9 @@
|
||||
],
|
||||
"source": [
|
||||
"%%time\n",
|
||||
"## tính ndvi theo tháng\n",
|
||||
"## t\u00ednh ndvi theo th\u00e1ng\n",
|
||||
"average_ndvi = ndvi.resample(time='1M').mean().persist()\n",
|
||||
"progress(average_ndvi)"
|
||||
"# progress(average_ndvi)"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -4253,12 +4253,12 @@
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"# cấu hình vh vv file\n",
|
||||
"# c\u1ea5u h\u00ecnh vh vv file\n",
|
||||
"# name_vh = \"ThuanHoa/ThuanHoa_VH.tif\"\n",
|
||||
"# name_vv = \"ThuanHoa/ThuanHoa_VV.tif\"\n",
|
||||
"\n",
|
||||
"# load dữ liệu sen1\n",
|
||||
"# dsvh, dsvv = load_sen1(name_vh, name_vv)\n",
|
||||
"# load d\u1eef li\u1ec7u sen1\n",
|
||||
"bbox = [longtitude_range[0], latitude_range[0], longtitude_range[1], latitude_range[1]]\ntime_range = f'{date_range[0]}/{date_range[1]}'\n# dsvh, dsvv = load_sen1(bbox, time_range)\n",
|
||||
"\n",
|
||||
"name_vh = \"vh-0922_0923-full_ST.tif\"\n",
|
||||
"name_vv = \"vv-0922_0923-full_ST.tif\"\n",
|
||||
@@ -4268,7 +4268,7 @@
|
||||
"if not os.path.exists(name_vv):\n",
|
||||
" !aws s3 cp s3://easi-asia-dc-data/staging/ctu/sentinel-1/vv-0922_0923-full_ST.tif vv-0922_0923-full_ST.tif\n",
|
||||
" \n",
|
||||
"dsvh, dsvv = load_sen1(name_vh, name_vv)"
|
||||
"bbox = [longtitude_range[0], latitude_range[0], longtitude_range[1], latitude_range[1]]\ntime_range = f'{date_range[0]}/{date_range[1]}'\ndsvh, dsvv = load_sen1(bbox, time_range)"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -4326,7 +4326,7 @@
|
||||
{
|
||||
"data": {
|
||||
"text/html": [
|
||||
"<style>#sk-container-id-1 {color: black;}#sk-container-id-1 pre{padding: 0;}#sk-container-id-1 div.sk-toggleable {background-color: white;}#sk-container-id-1 label.sk-toggleable__label {cursor: pointer;display: block;width: 100%;margin-bottom: 0;padding: 0.3em;box-sizing: border-box;text-align: center;}#sk-container-id-1 label.sk-toggleable__label-arrow:before {content: \"▸\";float: left;margin-right: 0.25em;color: #696969;}#sk-container-id-1 label.sk-toggleable__label-arrow:hover:before {color: black;}#sk-container-id-1 div.sk-estimator:hover label.sk-toggleable__label-arrow:before {color: black;}#sk-container-id-1 div.sk-toggleable__content {max-height: 0;max-width: 0;overflow: hidden;text-align: left;background-color: #f0f8ff;}#sk-container-id-1 div.sk-toggleable__content pre {margin: 0.2em;color: black;border-radius: 0.25em;background-color: #f0f8ff;}#sk-container-id-1 input.sk-toggleable__control:checked~div.sk-toggleable__content {max-height: 200px;max-width: 100%;overflow: auto;}#sk-container-id-1 input.sk-toggleable__control:checked~label.sk-toggleable__label-arrow:before {content: \"▾\";}#sk-container-id-1 div.sk-estimator input.sk-toggleable__control:checked~label.sk-toggleable__label {background-color: #d4ebff;}#sk-container-id-1 div.sk-label input.sk-toggleable__control:checked~label.sk-toggleable__label {background-color: #d4ebff;}#sk-container-id-1 input.sk-hidden--visually {border: 0;clip: rect(1px 1px 1px 1px);clip: rect(1px, 1px, 1px, 1px);height: 1px;margin: -1px;overflow: hidden;padding: 0;position: absolute;width: 1px;}#sk-container-id-1 div.sk-estimator {font-family: monospace;background-color: #f0f8ff;border: 1px dotted black;border-radius: 0.25em;box-sizing: border-box;margin-bottom: 0.5em;}#sk-container-id-1 div.sk-estimator:hover {background-color: #d4ebff;}#sk-container-id-1 div.sk-parallel-item::after {content: \"\";width: 100%;border-bottom: 1px solid gray;flex-grow: 1;}#sk-container-id-1 div.sk-label:hover label.sk-toggleable__label {background-color: #d4ebff;}#sk-container-id-1 div.sk-serial::before {content: \"\";position: absolute;border-left: 1px solid gray;box-sizing: border-box;top: 0;bottom: 0;left: 50%;z-index: 0;}#sk-container-id-1 div.sk-serial {display: flex;flex-direction: column;align-items: center;background-color: white;padding-right: 0.2em;padding-left: 0.2em;position: relative;}#sk-container-id-1 div.sk-item {position: relative;z-index: 1;}#sk-container-id-1 div.sk-parallel {display: flex;align-items: stretch;justify-content: center;background-color: white;position: relative;}#sk-container-id-1 div.sk-item::before, #sk-container-id-1 div.sk-parallel-item::before {content: \"\";position: absolute;border-left: 1px solid gray;box-sizing: border-box;top: 0;bottom: 0;left: 50%;z-index: -1;}#sk-container-id-1 div.sk-parallel-item {display: flex;flex-direction: column;z-index: 1;position: relative;background-color: white;}#sk-container-id-1 div.sk-parallel-item:first-child::after {align-self: flex-end;width: 50%;}#sk-container-id-1 div.sk-parallel-item:last-child::after {align-self: flex-start;width: 50%;}#sk-container-id-1 div.sk-parallel-item:only-child::after {width: 0;}#sk-container-id-1 div.sk-dashed-wrapped {border: 1px dashed gray;margin: 0 0.4em 0.5em 0.4em;box-sizing: border-box;padding-bottom: 0.4em;background-color: white;}#sk-container-id-1 div.sk-label label {font-family: monospace;font-weight: bold;display: inline-block;line-height: 1.2em;}#sk-container-id-1 div.sk-label-container {text-align: center;}#sk-container-id-1 div.sk-container {/* jupyter's `normalize.less` sets `[hidden] { display: none; }` but bootstrap.min.css set `[hidden] { display: none !important; }` so we also need the `!important` here to be able to override the default hidden behavior on the sphinx rendered scikit-learn.org. See: https://github.com/scikit-learn/scikit-learn/issues/21755 */display: inline-block !important;position: relative;}#sk-container-id-1 div.sk-text-repr-fallback {display: none;}</style><div id=\"sk-container-id-1\" class=\"sk-top-container\"><div class=\"sk-text-repr-fallback\"><pre>LinearRegression()</pre><b>In a Jupyter environment, please rerun this cell to show the HTML representation or trust the notebook. <br />On GitHub, the HTML representation is unable to render, please try loading this page with nbviewer.org.</b></div><div class=\"sk-container\" hidden><div class=\"sk-item\"><div class=\"sk-estimator sk-toggleable\"><input class=\"sk-toggleable__control sk-hidden--visually\" id=\"sk-estimator-id-1\" type=\"checkbox\" checked><label for=\"sk-estimator-id-1\" class=\"sk-toggleable__label sk-toggleable__label-arrow\">LinearRegression</label><div class=\"sk-toggleable__content\"><pre>LinearRegression()</pre></div></div></div></div></div>"
|
||||
"<style>#sk-container-id-1 {color: black;}#sk-container-id-1 pre{padding: 0;}#sk-container-id-1 div.sk-toggleable {background-color: white;}#sk-container-id-1 label.sk-toggleable__label {cursor: pointer;display: block;width: 100%;margin-bottom: 0;padding: 0.3em;box-sizing: border-box;text-align: center;}#sk-container-id-1 label.sk-toggleable__label-arrow:before {content: \"\u25b8\";float: left;margin-right: 0.25em;color: #696969;}#sk-container-id-1 label.sk-toggleable__label-arrow:hover:before {color: black;}#sk-container-id-1 div.sk-estimator:hover label.sk-toggleable__label-arrow:before {color: black;}#sk-container-id-1 div.sk-toggleable__content {max-height: 0;max-width: 0;overflow: hidden;text-align: left;background-color: #f0f8ff;}#sk-container-id-1 div.sk-toggleable__content pre {margin: 0.2em;color: black;border-radius: 0.25em;background-color: #f0f8ff;}#sk-container-id-1 input.sk-toggleable__control:checked~div.sk-toggleable__content {max-height: 200px;max-width: 100%;overflow: auto;}#sk-container-id-1 input.sk-toggleable__control:checked~label.sk-toggleable__label-arrow:before {content: \"\u25be\";}#sk-container-id-1 div.sk-estimator input.sk-toggleable__control:checked~label.sk-toggleable__label {background-color: #d4ebff;}#sk-container-id-1 div.sk-label input.sk-toggleable__control:checked~label.sk-toggleable__label {background-color: #d4ebff;}#sk-container-id-1 input.sk-hidden--visually {border: 0;clip: rect(1px 1px 1px 1px);clip: rect(1px, 1px, 1px, 1px);height: 1px;margin: -1px;overflow: hidden;padding: 0;position: absolute;width: 1px;}#sk-container-id-1 div.sk-estimator {font-family: monospace;background-color: #f0f8ff;border: 1px dotted black;border-radius: 0.25em;box-sizing: border-box;margin-bottom: 0.5em;}#sk-container-id-1 div.sk-estimator:hover {background-color: #d4ebff;}#sk-container-id-1 div.sk-parallel-item::after {content: \"\";width: 100%;border-bottom: 1px solid gray;flex-grow: 1;}#sk-container-id-1 div.sk-label:hover label.sk-toggleable__label {background-color: #d4ebff;}#sk-container-id-1 div.sk-serial::before {content: \"\";position: absolute;border-left: 1px solid gray;box-sizing: border-box;top: 0;bottom: 0;left: 50%;z-index: 0;}#sk-container-id-1 div.sk-serial {display: flex;flex-direction: column;align-items: center;background-color: white;padding-right: 0.2em;padding-left: 0.2em;position: relative;}#sk-container-id-1 div.sk-item {position: relative;z-index: 1;}#sk-container-id-1 div.sk-parallel {display: flex;align-items: stretch;justify-content: center;background-color: white;position: relative;}#sk-container-id-1 div.sk-item::before, #sk-container-id-1 div.sk-parallel-item::before {content: \"\";position: absolute;border-left: 1px solid gray;box-sizing: border-box;top: 0;bottom: 0;left: 50%;z-index: -1;}#sk-container-id-1 div.sk-parallel-item {display: flex;flex-direction: column;z-index: 1;position: relative;background-color: white;}#sk-container-id-1 div.sk-parallel-item:first-child::after {align-self: flex-end;width: 50%;}#sk-container-id-1 div.sk-parallel-item:last-child::after {align-self: flex-start;width: 50%;}#sk-container-id-1 div.sk-parallel-item:only-child::after {width: 0;}#sk-container-id-1 div.sk-dashed-wrapped {border: 1px dashed gray;margin: 0 0.4em 0.5em 0.4em;box-sizing: border-box;padding-bottom: 0.4em;background-color: white;}#sk-container-id-1 div.sk-label label {font-family: monospace;font-weight: bold;display: inline-block;line-height: 1.2em;}#sk-container-id-1 div.sk-label-container {text-align: center;}#sk-container-id-1 div.sk-container {/* jupyter's `normalize.less` sets `[hidden] { display: none; }` but bootstrap.min.css set `[hidden] { display: none !important; }` so we also need the `!important` here to be able to override the default hidden behavior on the sphinx rendered scikit-learn.org. See: https://github.com/scikit-learn/scikit-learn/issues/21755 */display: inline-block !important;position: relative;}#sk-container-id-1 div.sk-text-repr-fallback {display: none;}</style><div id=\"sk-container-id-1\" class=\"sk-top-container\"><div class=\"sk-text-repr-fallback\"><pre>LinearRegression()</pre><b>In a Jupyter environment, please rerun this cell to show the HTML representation or trust the notebook. <br />On GitHub, the HTML representation is unable to render, please try loading this page with nbviewer.org.</b></div><div class=\"sk-container\" hidden><div class=\"sk-item\"><div class=\"sk-estimator sk-toggleable\"><input class=\"sk-toggleable__control sk-hidden--visually\" id=\"sk-estimator-id-1\" type=\"checkbox\" checked><label for=\"sk-estimator-id-1\" class=\"sk-toggleable__label sk-toggleable__label-arrow\">LinearRegression</label><div class=\"sk-toggleable__content\"><pre>LinearRegression()</pre></div></div></div></div></div>"
|
||||
],
|
||||
"text/plain": [
|
||||
"LinearRegression()"
|
||||
@@ -4397,7 +4397,7 @@
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"plt.imshow(average_ndvi_filled.isel(time=6))"
|
||||
"plt.imshow(average_ndvi_filled.isel(time=0))"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -4430,7 +4430,7 @@
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"plt.imshow(average_ndvi.isel(time=6))"
|
||||
"plt.imshow(average_ndvi.isel(time=0))"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -4440,7 +4440,7 @@
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"train_path = \"train/ST_training data_updated_1130points.shp\""
|
||||
"train_path = \"train/ST_training_data_updated_1130points.shp\""
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -4476,7 +4476,7 @@
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"# cấu hình nhãn dữ liệu\n",
|
||||
"# c\u1ea5u h\u00ecnh nh\u00e3n d\u1eef li\u1ec7u\n",
|
||||
"label_mapping = {\n",
|
||||
" \"Lua tom\": \"0\",\n",
|
||||
" \"Lua\": \"1\",\n",
|
||||
@@ -4488,7 +4488,7 @@
|
||||
" \"Rung\": \"7\"\n",
|
||||
"}\n",
|
||||
"\n",
|
||||
"# chia tập dữ liệu train, val, test\n",
|
||||
"# chia t\u1eadp d\u1eef li\u1ec7u train, val, test\n",
|
||||
"X_train, X_val, X_test, y_train, y_val, y_test = split_train_data(train, label_mapping, datasets)"
|
||||
]
|
||||
},
|
||||
@@ -4510,7 +4510,7 @@
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"# Huấn luyện mô hình\n",
|
||||
"# Hu\u1ea5n luy\u1ec7n m\u00f4 h\u00ecnh\n",
|
||||
"grid_search = train_with_rf(X_train, X_val, y_train, y_val)"
|
||||
]
|
||||
},
|
||||
@@ -4531,7 +4531,7 @@
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"# kiểm tra độ chính xác với tập test\n",
|
||||
"# ki\u1ec3m tra \u0111\u1ed9 ch\u00ednh x\u00e1c v\u1edbi t\u1eadp test\n",
|
||||
"y_pred_test = grid_search.predict(X_test)\n",
|
||||
"test_accuracy = accuracy_score(y_test, y_pred_test)\n",
|
||||
"print(f\"Accuracy for test data {round(test_accuracy, 2)*100} %\")"
|
||||
@@ -4554,7 +4554,7 @@
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"# Lưu mô hình huấn luyện\n",
|
||||
"# L\u01b0u m\u00f4 h\u00ecnh hu\u1ea5n luy\u1ec7n\n",
|
||||
"save_model(\"model_new.joblib\", grid_search)"
|
||||
]
|
||||
},
|
||||
@@ -4567,7 +4567,7 @@
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"# đóng client, cluster\n",
|
||||
"# \u0111\u00f3ng client, cluster\n",
|
||||
"client.close()\n",
|
||||
"cluster.close()"
|
||||
]
|
||||
@@ -4602,4 +4602,4 @@
|
||||
},
|
||||
"nbformat": 4,
|
||||
"nbformat_minor": 5
|
||||
}
|
||||
}
|
||||
@@ -0,0 +1,272 @@
|
||||
#!/usr/bin/env python
|
||||
# coding: utf-8
|
||||
|
||||
# In[1]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', '%matplotlib inline\nfrom new_import import *\n')
|
||||
|
||||
|
||||
# In[2]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', '# Dask gateway\ncluster, client = notebook_utils.initialize_dask(use_gateway=True, workers=(1,4))\ndc = datacube.Datacube()\n\n# Configure s3 access\nconfigure_s3_access(aws_unsigned=False, requester_pays=True, client=client)\n\nclient\n')
|
||||
|
||||
|
||||
# In[3]:
|
||||
|
||||
|
||||
## cấu hình thời gian lấy ảnh và tọa độ
|
||||
# date_range = ('2022-09-01', '2023-10-01')
|
||||
# longtitude_range = (105.86575, 105.94120)
|
||||
# latitude_range = (9.65070, 9.69850)
|
||||
date_range = ('2022-09-01', '2023-10-01')
|
||||
longtitude_range = (105.5, 106.4)
|
||||
latitude_range = (9.2, 10.0)
|
||||
|
||||
|
||||
# In[4]:
|
||||
|
||||
|
||||
## truy vấn ảnh vệ tinh sen2
|
||||
data = load_data(dc, date_range, longtitude_range, latitude_range)
|
||||
notebook_utils.heading(notebook_utils.xarray_object_size(data))
|
||||
display(data)
|
||||
|
||||
|
||||
# In[5]:
|
||||
|
||||
|
||||
# Specify the start and end times
|
||||
min_date = '2022-09-01' # Thời gian bắt đầu lấy data cho quá trình train
|
||||
max_date = '2023-10-01' # Thời gian kết thúc lấy data cho quá trình train
|
||||
# Just do 1 month for testing
|
||||
# max_date = '2022-10-01' # Thời gian kết thúc lấy data cho quá trình train
|
||||
|
||||
# Specify a spatail region to search using latitude/longitude cooridinates
|
||||
min_longitude, max_longitude = (105.5, 106.4)
|
||||
min_latitude, max_latitude = (9.2, 10.0)
|
||||
|
||||
# Specify the product. In this case we want to use Sentinel-2 Level-2A data
|
||||
product = 's2_l2a'
|
||||
|
||||
# Construct the search query dictionary
|
||||
query = {
|
||||
'product': product, # Product name
|
||||
'x': (min_longitude, max_longitude), # "x" axis bounds
|
||||
'y': (min_latitude, max_latitude), # "y" axis bounds
|
||||
'time': (min_date, max_date), # Any parsable date strings
|
||||
}
|
||||
|
||||
|
||||
# In[6]:
|
||||
|
||||
|
||||
# Most common CRS
|
||||
native_crs = notebook_utils.mostcommon_crs(dc, query)
|
||||
print(f'Most common native CRS: {native_crs}')
|
||||
|
||||
|
||||
# In[7]:
|
||||
|
||||
|
||||
# Specify the spectral band measurements we want to use for a classification algorithm
|
||||
measurements = ['red', 'nir', 'scl']
|
||||
|
||||
load_params = {
|
||||
'measurements': measurements, # Selected measurement or alias names
|
||||
'output_crs': native_crs, # Target EPSG code
|
||||
'resolution': (-10, 10), # Target resolution
|
||||
'group_by': 'solar_day', # Scene grouping
|
||||
'dask_chunks': {'x': 2048, 'y': 2048}, # Dask chunks
|
||||
}
|
||||
|
||||
|
||||
# In[8]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', '# The replacement "dc.load()" function for this product\ndata = load_s2l2a_with_offset(\n dc,\n query | load_params # Combine the two dicts that contain our search and load parameters\n)\n\n# This line prints the total size of the dataset hat was loaded\nnotebook_utils.heading(notebook_utils.xarray_object_size(data))\n\ndisplay(data)\n')
|
||||
|
||||
|
||||
# In[9]:
|
||||
|
||||
|
||||
# %%time
|
||||
# # Tiến hành loại bỏ các vị trí bị mây ảnh hưởng
|
||||
# result = mask_clean(data)
|
||||
# progress(result)
|
||||
|
||||
|
||||
# In[10]:
|
||||
|
||||
|
||||
# Tiến hành tính toán NDVI
|
||||
ds1 = calculate_indices(result, index='NDVI', satellite_mission='s2')
|
||||
ndvi = ds1["NDVI"]
|
||||
display(ndvi)
|
||||
|
||||
|
||||
# In[11]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', "## tính ndvi theo tháng\naverage_ndvi = ndvi.resample(time='1M').mean().persist()\nprogress(average_ndvi)\n")
|
||||
|
||||
|
||||
# In[12]:
|
||||
|
||||
|
||||
# compute average_ndvi
|
||||
average_ndvi = average_ndvi.compute()
|
||||
|
||||
|
||||
# In[13]:
|
||||
|
||||
|
||||
# cấu hình vh vv file
|
||||
# name_vh = "ThuanHoa/ThuanHoa_VH.tif"
|
||||
# name_vv = "ThuanHoa/ThuanHoa_VV.tif"
|
||||
|
||||
# load dữ liệu sen1
|
||||
bbox = [105.5, 9.2, 106.4, 10.0]
|
||||
time_range = '2022-09-01/2023-10-01'
|
||||
# dsvh, dsvv = load_sen1(bbox, time_range)
|
||||
|
||||
name_vh = "vh-0922_0923-full_ST.tif"
|
||||
name_vv = "vv-0922_0923-full_ST.tif"
|
||||
|
||||
if not os.path.exists(name_vh):
|
||||
get_ipython().system('aws s3 cp s3://easi-asia-dc-data/staging/ctu/sentinel-1/vh-0922_0923-full_ST.tif vh-0922_0923-full_ST.tif')
|
||||
if not os.path.exists(name_vv):
|
||||
get_ipython().system('aws s3 cp s3://easi-asia-dc-data/staging/ctu/sentinel-1/vv-0922_0923-full_ST.tif vv-0922_0923-full_ST.tif')
|
||||
|
||||
bbox = [105.5, 9.2, 106.4, 10.0]
|
||||
time_range = '2022-09-01/2023-10-01'
|
||||
dsvh, dsvv = load_sen1(bbox, time_range)
|
||||
|
||||
|
||||
# In[27]:
|
||||
|
||||
|
||||
from sklearn.preprocessing import PolynomialFeatures
|
||||
from sklearn.linear_model import LinearRegression
|
||||
from sklearn.ensemble import RandomForestRegressor
|
||||
|
||||
|
||||
# In[28]:
|
||||
|
||||
|
||||
average_ndvi = average_ndvi[:, :7680, :8687]
|
||||
mask = ~np.isnan(average_ndvi)
|
||||
print(average_ndvi.shape)
|
||||
print(dsvh.shape)
|
||||
print(dsvv.shape)
|
||||
print(mask.shape)
|
||||
X_train = np.stack([dsvh.values[mask], dsvv.values[mask]], axis=1)
|
||||
y_train = average_ndvi.values[mask]
|
||||
|
||||
|
||||
# In[29]:
|
||||
|
||||
|
||||
model = LinearRegression()
|
||||
model.fit(X_train, y_train)
|
||||
|
||||
|
||||
# In[30]:
|
||||
|
||||
|
||||
X_pred = np.stack([dsvh.values[~mask], dsvv.values[~mask]], axis=1)
|
||||
average_ndvi.values[~mask] = model.predict(X_pred)
|
||||
|
||||
|
||||
# In[31]:
|
||||
|
||||
|
||||
average_ndvi_filled = xr.DataArray(average_ndvi, dims=average_ndvi.dims)
|
||||
|
||||
|
||||
# In[32]:
|
||||
|
||||
|
||||
plt.imshow(average_ndvi_filled.isel(time=6))
|
||||
|
||||
|
||||
# In[65]:
|
||||
|
||||
|
||||
plt.imshow(average_ndvi.isel(time=6))
|
||||
|
||||
|
||||
# In[33]:
|
||||
|
||||
|
||||
train_path = "train/ST_training data_updated_1130points.shp"
|
||||
|
||||
|
||||
# In[34]:
|
||||
|
||||
|
||||
train = load_train_data(train_path)
|
||||
|
||||
|
||||
# In[37]:
|
||||
|
||||
|
||||
datasets = get_data_sen1_and_sen2(train, average_ndvi_filled, dsvh, dsvv)
|
||||
|
||||
|
||||
# In[39]:
|
||||
|
||||
|
||||
# cấu hình nhãn dữ liệu
|
||||
label_mapping = {
|
||||
"Lua tom": "0",
|
||||
"Lua": "1",
|
||||
"CHN": "2",
|
||||
"CLN": "3",
|
||||
"TS": "4",
|
||||
"Song": "5",
|
||||
"Dat xay dung": "6",
|
||||
"Rung": "7"
|
||||
}
|
||||
|
||||
# chia tập dữ liệu train, val, test
|
||||
X_train, X_val, X_test, y_train, y_val, y_test = split_train_data(train, label_mapping, datasets)
|
||||
|
||||
|
||||
# In[40]:
|
||||
|
||||
|
||||
# Huấn luyện mô hình
|
||||
grid_search = train_with_rf(X_train, X_val, y_train, y_val)
|
||||
|
||||
|
||||
# In[41]:
|
||||
|
||||
|
||||
# kiểm tra độ chính xác với tập test
|
||||
y_pred_test = grid_search.predict(X_test)
|
||||
test_accuracy = accuracy_score(y_test, y_pred_test)
|
||||
print(f"Accuracy for test data {round(test_accuracy, 2)*100} %")
|
||||
|
||||
|
||||
# In[42]:
|
||||
|
||||
|
||||
# Lưu mô hình huấn luyện
|
||||
save_model("model_new.joblib", grid_search)
|
||||
|
||||
|
||||
# In[43]:
|
||||
|
||||
|
||||
# đóng client, cluster
|
||||
client.close()
|
||||
cluster.close()
|
||||
|
||||
|
||||
# In[ ]:
|
||||
|
||||
|
||||
|
||||
|
||||
@@ -1132,7 +1132,7 @@
|
||||
"source": [
|
||||
"%%time\n",
|
||||
"%matplotlib inline\n",
|
||||
"from new_import import *"
|
||||
"from new_import_ODC import *"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -1216,7 +1216,7 @@
|
||||
"%%time\n",
|
||||
"# Dask gateway\n",
|
||||
"cluster, client = notebook_utils.initialize_dask(use_gateway=True, workers=(1,4))\n",
|
||||
"dc = datacube.Datacube()\n",
|
||||
"dc = None\n",
|
||||
"\n",
|
||||
"# Configure s3 access\n",
|
||||
"configure_s3_access(aws_unsigned=False, requester_pays=True, client=client)\n",
|
||||
@@ -1233,8 +1233,8 @@
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"## cấu hình thời gian lấy ảnh và tọa độ\n",
|
||||
"date_range = ('2022-09-01', '2023-10-01')\n",
|
||||
"## c\u1ea5u h\u00ecnh th\u1eddi gian l\u1ea5y \u1ea3nh v\u00e0 t\u1ecda \u0111\u1ed9\n",
|
||||
"date_range = ('2022-09-01', '2022-10-01')\n",
|
||||
"longtitude_range = (105.86575, 105.94120)\n",
|
||||
"latitude_range = (9.65070, 9.69850)"
|
||||
]
|
||||
@@ -1393,7 +1393,7 @@
|
||||
"\n",
|
||||
".xr-section-summary-in + label:before {\n",
|
||||
" display: inline-block;\n",
|
||||
" content: '►';\n",
|
||||
" content: '\u25ba';\n",
|
||||
" font-size: 11px;\n",
|
||||
" width: 15px;\n",
|
||||
" text-align: center;\n",
|
||||
@@ -1404,7 +1404,7 @@
|
||||
"}\n",
|
||||
"\n",
|
||||
".xr-section-summary-in:checked + label:before {\n",
|
||||
" content: '▼';\n",
|
||||
" content: '\u25bc';\n",
|
||||
"}\n",
|
||||
"\n",
|
||||
".xr-section-summary-in:checked + label > span {\n",
|
||||
@@ -2333,8 +2333,8 @@
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"## truy vấn ảnh vệ tinh sen2\n",
|
||||
"data = load_data(dc, date_range, longtitude_range, latitude_range)\n",
|
||||
"## truy v\u1ea5n \u1ea3nh v\u1ec7 tinh sen2\n",
|
||||
"data = load_data(None, date_range, longtitude_range, latitude_range)\n",
|
||||
"notebook_utils.heading(notebook_utils.xarray_object_size(data))\n",
|
||||
"display(data)"
|
||||
]
|
||||
@@ -2443,9 +2443,9 @@
|
||||
],
|
||||
"source": [
|
||||
"%%time\n",
|
||||
"# Tiến hành loại bỏ các vị trí bị mây ảnh hưởng\n",
|
||||
"# Ti\u1ebfn h\u00e0nh lo\u1ea1i b\u1ecf c\u00e1c v\u1ecb tr\u00ed b\u1ecb m\u00e2y \u1ea3nh h\u01b0\u1edfng\n",
|
||||
"result = mask_clean(data)\n",
|
||||
"progress(result)"
|
||||
"# progress(result)"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -2581,7 +2581,7 @@
|
||||
"\n",
|
||||
".xr-section-summary-in + label:before {\n",
|
||||
" display: inline-block;\n",
|
||||
" content: '►';\n",
|
||||
" content: '\u25ba';\n",
|
||||
" font-size: 11px;\n",
|
||||
" width: 15px;\n",
|
||||
" text-align: center;\n",
|
||||
@@ -2592,7 +2592,7 @@
|
||||
"}\n",
|
||||
"\n",
|
||||
".xr-section-summary-in:checked + label:before {\n",
|
||||
" content: '▼';\n",
|
||||
" content: '\u25bc';\n",
|
||||
"}\n",
|
||||
"\n",
|
||||
".xr-section-summary-in:checked + label > span {\n",
|
||||
@@ -3047,7 +3047,7 @@
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"# Tiến hành tính toán NDVI\n",
|
||||
"# Ti\u1ebfn h\u00e0nh t\u00ednh to\u00e1n NDVI\n",
|
||||
"ds1 = calculate_indices(result, index='NDVI', satellite_mission='s2')\n",
|
||||
"ndvi = ds1[\"NDVI\"]\n",
|
||||
"display(ndvi)"
|
||||
@@ -3086,9 +3086,9 @@
|
||||
],
|
||||
"source": [
|
||||
"%%time\n",
|
||||
"## tính ndvi theo tháng\n",
|
||||
"## t\u00ednh ndvi theo th\u00e1ng\n",
|
||||
"average_ndvi = ndvi.resample(time='1M').mean().persist()\n",
|
||||
"progress(average_ndvi)"
|
||||
"# progress(average_ndvi)"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -3113,12 +3113,12 @@
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"# cấu hình vh vv file\n",
|
||||
"# c\u1ea5u h\u00ecnh vh vv file\n",
|
||||
"name_vh = \"ThuanHoa/ThuanHoa_VH.tif\"\n",
|
||||
"name_vv = \"ThuanHoa/ThuanHoa_VV.tif\"\n",
|
||||
"\n",
|
||||
"# load dữ liệu sen1\n",
|
||||
"dsvh, dsvv = load_sen1(name_vh, name_vv)"
|
||||
"# load d\u1eef li\u1ec7u sen1\n",
|
||||
"bbox = [longtitude_range[0], latitude_range[0], longtitude_range[1], latitude_range[1]]\ntime_range = f'{date_range[0]}/{date_range[1]}'\ndsvh, dsvv = load_sen1(bbox, time_range)"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -3160,7 +3160,7 @@
|
||||
{
|
||||
"data": {
|
||||
"text/html": [
|
||||
"<style>#sk-container-id-1 {color: black;}#sk-container-id-1 pre{padding: 0;}#sk-container-id-1 div.sk-toggleable {background-color: white;}#sk-container-id-1 label.sk-toggleable__label {cursor: pointer;display: block;width: 100%;margin-bottom: 0;padding: 0.3em;box-sizing: border-box;text-align: center;}#sk-container-id-1 label.sk-toggleable__label-arrow:before {content: \"▸\";float: left;margin-right: 0.25em;color: #696969;}#sk-container-id-1 label.sk-toggleable__label-arrow:hover:before {color: black;}#sk-container-id-1 div.sk-estimator:hover label.sk-toggleable__label-arrow:before {color: black;}#sk-container-id-1 div.sk-toggleable__content {max-height: 0;max-width: 0;overflow: hidden;text-align: left;background-color: #f0f8ff;}#sk-container-id-1 div.sk-toggleable__content pre {margin: 0.2em;color: black;border-radius: 0.25em;background-color: #f0f8ff;}#sk-container-id-1 input.sk-toggleable__control:checked~div.sk-toggleable__content {max-height: 200px;max-width: 100%;overflow: auto;}#sk-container-id-1 input.sk-toggleable__control:checked~label.sk-toggleable__label-arrow:before {content: \"▾\";}#sk-container-id-1 div.sk-estimator input.sk-toggleable__control:checked~label.sk-toggleable__label {background-color: #d4ebff;}#sk-container-id-1 div.sk-label input.sk-toggleable__control:checked~label.sk-toggleable__label {background-color: #d4ebff;}#sk-container-id-1 input.sk-hidden--visually {border: 0;clip: rect(1px 1px 1px 1px);clip: rect(1px, 1px, 1px, 1px);height: 1px;margin: -1px;overflow: hidden;padding: 0;position: absolute;width: 1px;}#sk-container-id-1 div.sk-estimator {font-family: monospace;background-color: #f0f8ff;border: 1px dotted black;border-radius: 0.25em;box-sizing: border-box;margin-bottom: 0.5em;}#sk-container-id-1 div.sk-estimator:hover {background-color: #d4ebff;}#sk-container-id-1 div.sk-parallel-item::after {content: \"\";width: 100%;border-bottom: 1px solid gray;flex-grow: 1;}#sk-container-id-1 div.sk-label:hover label.sk-toggleable__label {background-color: #d4ebff;}#sk-container-id-1 div.sk-serial::before {content: \"\";position: absolute;border-left: 1px solid gray;box-sizing: border-box;top: 0;bottom: 0;left: 50%;z-index: 0;}#sk-container-id-1 div.sk-serial {display: flex;flex-direction: column;align-items: center;background-color: white;padding-right: 0.2em;padding-left: 0.2em;position: relative;}#sk-container-id-1 div.sk-item {position: relative;z-index: 1;}#sk-container-id-1 div.sk-parallel {display: flex;align-items: stretch;justify-content: center;background-color: white;position: relative;}#sk-container-id-1 div.sk-item::before, #sk-container-id-1 div.sk-parallel-item::before {content: \"\";position: absolute;border-left: 1px solid gray;box-sizing: border-box;top: 0;bottom: 0;left: 50%;z-index: -1;}#sk-container-id-1 div.sk-parallel-item {display: flex;flex-direction: column;z-index: 1;position: relative;background-color: white;}#sk-container-id-1 div.sk-parallel-item:first-child::after {align-self: flex-end;width: 50%;}#sk-container-id-1 div.sk-parallel-item:last-child::after {align-self: flex-start;width: 50%;}#sk-container-id-1 div.sk-parallel-item:only-child::after {width: 0;}#sk-container-id-1 div.sk-dashed-wrapped {border: 1px dashed gray;margin: 0 0.4em 0.5em 0.4em;box-sizing: border-box;padding-bottom: 0.4em;background-color: white;}#sk-container-id-1 div.sk-label label {font-family: monospace;font-weight: bold;display: inline-block;line-height: 1.2em;}#sk-container-id-1 div.sk-label-container {text-align: center;}#sk-container-id-1 div.sk-container {/* jupyter's `normalize.less` sets `[hidden] { display: none; }` but bootstrap.min.css set `[hidden] { display: none !important; }` so we also need the `!important` here to be able to override the default hidden behavior on the sphinx rendered scikit-learn.org. See: https://github.com/scikit-learn/scikit-learn/issues/21755 */display: inline-block !important;position: relative;}#sk-container-id-1 div.sk-text-repr-fallback {display: none;}</style><div id=\"sk-container-id-1\" class=\"sk-top-container\"><div class=\"sk-text-repr-fallback\"><pre>LinearRegression()</pre><b>In a Jupyter environment, please rerun this cell to show the HTML representation or trust the notebook. <br />On GitHub, the HTML representation is unable to render, please try loading this page with nbviewer.org.</b></div><div class=\"sk-container\" hidden><div class=\"sk-item\"><div class=\"sk-estimator sk-toggleable\"><input class=\"sk-toggleable__control sk-hidden--visually\" id=\"sk-estimator-id-1\" type=\"checkbox\" checked><label for=\"sk-estimator-id-1\" class=\"sk-toggleable__label sk-toggleable__label-arrow\">LinearRegression</label><div class=\"sk-toggleable__content\"><pre>LinearRegression()</pre></div></div></div></div></div>"
|
||||
"<style>#sk-container-id-1 {color: black;}#sk-container-id-1 pre{padding: 0;}#sk-container-id-1 div.sk-toggleable {background-color: white;}#sk-container-id-1 label.sk-toggleable__label {cursor: pointer;display: block;width: 100%;margin-bottom: 0;padding: 0.3em;box-sizing: border-box;text-align: center;}#sk-container-id-1 label.sk-toggleable__label-arrow:before {content: \"\u25b8\";float: left;margin-right: 0.25em;color: #696969;}#sk-container-id-1 label.sk-toggleable__label-arrow:hover:before {color: black;}#sk-container-id-1 div.sk-estimator:hover label.sk-toggleable__label-arrow:before {color: black;}#sk-container-id-1 div.sk-toggleable__content {max-height: 0;max-width: 0;overflow: hidden;text-align: left;background-color: #f0f8ff;}#sk-container-id-1 div.sk-toggleable__content pre {margin: 0.2em;color: black;border-radius: 0.25em;background-color: #f0f8ff;}#sk-container-id-1 input.sk-toggleable__control:checked~div.sk-toggleable__content {max-height: 200px;max-width: 100%;overflow: auto;}#sk-container-id-1 input.sk-toggleable__control:checked~label.sk-toggleable__label-arrow:before {content: \"\u25be\";}#sk-container-id-1 div.sk-estimator input.sk-toggleable__control:checked~label.sk-toggleable__label {background-color: #d4ebff;}#sk-container-id-1 div.sk-label input.sk-toggleable__control:checked~label.sk-toggleable__label {background-color: #d4ebff;}#sk-container-id-1 input.sk-hidden--visually {border: 0;clip: rect(1px 1px 1px 1px);clip: rect(1px, 1px, 1px, 1px);height: 1px;margin: -1px;overflow: hidden;padding: 0;position: absolute;width: 1px;}#sk-container-id-1 div.sk-estimator {font-family: monospace;background-color: #f0f8ff;border: 1px dotted black;border-radius: 0.25em;box-sizing: border-box;margin-bottom: 0.5em;}#sk-container-id-1 div.sk-estimator:hover {background-color: #d4ebff;}#sk-container-id-1 div.sk-parallel-item::after {content: \"\";width: 100%;border-bottom: 1px solid gray;flex-grow: 1;}#sk-container-id-1 div.sk-label:hover label.sk-toggleable__label {background-color: #d4ebff;}#sk-container-id-1 div.sk-serial::before {content: \"\";position: absolute;border-left: 1px solid gray;box-sizing: border-box;top: 0;bottom: 0;left: 50%;z-index: 0;}#sk-container-id-1 div.sk-serial {display: flex;flex-direction: column;align-items: center;background-color: white;padding-right: 0.2em;padding-left: 0.2em;position: relative;}#sk-container-id-1 div.sk-item {position: relative;z-index: 1;}#sk-container-id-1 div.sk-parallel {display: flex;align-items: stretch;justify-content: center;background-color: white;position: relative;}#sk-container-id-1 div.sk-item::before, #sk-container-id-1 div.sk-parallel-item::before {content: \"\";position: absolute;border-left: 1px solid gray;box-sizing: border-box;top: 0;bottom: 0;left: 50%;z-index: -1;}#sk-container-id-1 div.sk-parallel-item {display: flex;flex-direction: column;z-index: 1;position: relative;background-color: white;}#sk-container-id-1 div.sk-parallel-item:first-child::after {align-self: flex-end;width: 50%;}#sk-container-id-1 div.sk-parallel-item:last-child::after {align-self: flex-start;width: 50%;}#sk-container-id-1 div.sk-parallel-item:only-child::after {width: 0;}#sk-container-id-1 div.sk-dashed-wrapped {border: 1px dashed gray;margin: 0 0.4em 0.5em 0.4em;box-sizing: border-box;padding-bottom: 0.4em;background-color: white;}#sk-container-id-1 div.sk-label label {font-family: monospace;font-weight: bold;display: inline-block;line-height: 1.2em;}#sk-container-id-1 div.sk-label-container {text-align: center;}#sk-container-id-1 div.sk-container {/* jupyter's `normalize.less` sets `[hidden] { display: none; }` but bootstrap.min.css set `[hidden] { display: none !important; }` so we also need the `!important` here to be able to override the default hidden behavior on the sphinx rendered scikit-learn.org. See: https://github.com/scikit-learn/scikit-learn/issues/21755 */display: inline-block !important;position: relative;}#sk-container-id-1 div.sk-text-repr-fallback {display: none;}</style><div id=\"sk-container-id-1\" class=\"sk-top-container\"><div class=\"sk-text-repr-fallback\"><pre>LinearRegression()</pre><b>In a Jupyter environment, please rerun this cell to show the HTML representation or trust the notebook. <br />On GitHub, the HTML representation is unable to render, please try loading this page with nbviewer.org.</b></div><div class=\"sk-container\" hidden><div class=\"sk-item\"><div class=\"sk-estimator sk-toggleable\"><input class=\"sk-toggleable__control sk-hidden--visually\" id=\"sk-estimator-id-1\" type=\"checkbox\" checked><label for=\"sk-estimator-id-1\" class=\"sk-toggleable__label sk-toggleable__label-arrow\">LinearRegression</label><div class=\"sk-toggleable__content\"><pre>LinearRegression()</pre></div></div></div></div></div>"
|
||||
],
|
||||
"text/plain": [
|
||||
"LinearRegression()"
|
||||
@@ -3297,4 +3297,4 @@
|
||||
},
|
||||
"nbformat": 4,
|
||||
"nbformat_minor": 5
|
||||
}
|
||||
}
|
||||
@@ -0,0 +1,127 @@
|
||||
#!/usr/bin/env python
|
||||
# coding: utf-8
|
||||
|
||||
# In[1]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', '%matplotlib inline\nfrom new_import import *\n')
|
||||
|
||||
|
||||
# In[2]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', '# Dask gateway\ncluster, client = notebook_utils.initialize_dask(use_gateway=True, workers=(1,4))\ndc = datacube.Datacube()\n\n# Configure s3 access\nconfigure_s3_access(aws_unsigned=False, requester_pays=True, client=client)\n\nclient\n')
|
||||
|
||||
|
||||
# In[3]:
|
||||
|
||||
|
||||
## cấu hình thời gian lấy ảnh và tọa độ
|
||||
date_range = ('2022-09-01', '2023-10-01')
|
||||
longtitude_range = (105.86575, 105.94120)
|
||||
latitude_range = (9.65070, 9.69850)
|
||||
|
||||
|
||||
# In[4]:
|
||||
|
||||
|
||||
## truy vấn ảnh vệ tinh sen2
|
||||
data = load_data(dc, date_range, longtitude_range, latitude_range)
|
||||
notebook_utils.heading(notebook_utils.xarray_object_size(data))
|
||||
display(data)
|
||||
|
||||
|
||||
# In[5]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', '# Tiến hành loại bỏ các vị trí bị mây ảnh hưởng\nresult = mask_clean(data)\nprogress(result)\n')
|
||||
|
||||
|
||||
# In[6]:
|
||||
|
||||
|
||||
# Tiến hành tính toán NDVI
|
||||
ds1 = calculate_indices(result, index='NDVI', satellite_mission='s2')
|
||||
ndvi = ds1["NDVI"]
|
||||
display(ndvi)
|
||||
|
||||
|
||||
# In[17]:
|
||||
|
||||
|
||||
get_ipython().run_cell_magic('time', '', "## tính ndvi theo tháng\naverage_ndvi = ndvi.resample(time='1M').mean().persist()\nprogress(average_ndvi)\n")
|
||||
|
||||
|
||||
# In[18]:
|
||||
|
||||
|
||||
# compute average_ndvi
|
||||
average_ndvi = average_ndvi.compute()
|
||||
|
||||
|
||||
# In[9]:
|
||||
|
||||
|
||||
# cấu hình vh vv file
|
||||
name_vh = "ThuanHoa/ThuanHoa_VH.tif"
|
||||
name_vv = "ThuanHoa/ThuanHoa_VV.tif"
|
||||
|
||||
# load dữ liệu sen1
|
||||
bbox = [105.5, 9.2, 106.4, 10.0]
|
||||
time_range = '2022-09-01/2023-10-01'
|
||||
dsvh, dsvv = load_sen1(bbox, time_range)
|
||||
|
||||
|
||||
# In[10]:
|
||||
|
||||
|
||||
from sklearn.preprocessing import PolynomialFeatures
|
||||
from sklearn.linear_model import LinearRegression
|
||||
from sklearn.ensemble import RandomForestRegressor
|
||||
|
||||
|
||||
# In[11]:
|
||||
|
||||
|
||||
mask = ~np.isnan(average_ndvi)
|
||||
X_train = np.stack([dsvh.values[mask], dsvv.values[mask]], axis=1)
|
||||
y_train = average_ndvi.values[mask]
|
||||
|
||||
|
||||
# In[12]:
|
||||
|
||||
|
||||
model = LinearRegression()
|
||||
model.fit(X_train, y_train)
|
||||
|
||||
|
||||
# In[13]:
|
||||
|
||||
|
||||
X_pred = np.stack([dsvh.values[~mask], dsvv.values[~mask]], axis=1)
|
||||
average_ndvi.values[~mask] = model.predict(X_pred)
|
||||
|
||||
|
||||
# In[14]:
|
||||
|
||||
|
||||
average_ndvi_filled = xr.DataArray(average_ndvi, dims=average_ndvi.dims)
|
||||
|
||||
|
||||
# In[16]:
|
||||
|
||||
|
||||
plt.imshow(average_ndvi_filled.isel(time=1))
|
||||
|
||||
|
||||
# In[19]:
|
||||
|
||||
|
||||
plt.imshow(average_ndvi.isel(time=1))
|
||||
|
||||
|
||||
# In[ ]:
|
||||
|
||||
|
||||
|
||||
|
||||
@@ -0,0 +1,145 @@
|
||||
import json
|
||||
|
||||
def get_content(filename):
|
||||
with open(filename, "r", encoding="utf-8") as f:
|
||||
return f.read()
|
||||
|
||||
fe_content = get_content("feature_extractor.py")
|
||||
tm_content = get_content("train_module.py")
|
||||
dt_content = get_content("train_land_decision_tree_gpu.py")
|
||||
|
||||
notebook = {
|
||||
"cells": [
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"metadata": {},
|
||||
"source": [
|
||||
"# Tải Dữ liệu Vệ tinh qua Colab (Self-contained)\n",
|
||||
"Notebook này đã được nhúng sẵn toàn bộ mã nguồn xử lý. Bạn không cần upload cả thư mục `remote-sensing` nữa.\n",
|
||||
"\n",
|
||||
"## Bước 1: Upload Shapefile (BẮT BUỘC)\n",
|
||||
"Mô hình cần biết các điểm tọa độ đất để lấy dữ liệu. Hãy nén thư mục `train/` trên máy bạn thành `train.zip` và chạy ô dưới đây để upload nó trực tiếp lên Colab."
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": None,
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"from google.colab import files\n",
|
||||
"import os\n",
|
||||
"\n",
|
||||
"print(\"Hãy chọn file train.zip từ máy tính của bạn:\")\n",
|
||||
"uploaded = files.upload()\n",
|
||||
"\n",
|
||||
"if \"train.zip\" in uploaded:\n",
|
||||
" !unzip -q -o train.zip -d /content/train_tmp/\n",
|
||||
" # Move the extracted files directly to /content/train/\n",
|
||||
" !mkdir -p /content/train\n",
|
||||
" !mv /content/train_tmp/*/* /content/train/ 2>/dev/null || mv /content/train_tmp/* /content/train/\n",
|
||||
" print(\"Đã giải nén shapefile thành công vào thư mục /content/train/\")\n",
|
||||
"else:\n",
|
||||
" print(\"LỖI: Bạn chưa upload file có tên là train.zip!\")"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"metadata": {},
|
||||
"source": [
|
||||
"## Bước 2: Cài đặt thư viện & Tạo môi trường"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": None,
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"!pip install planetary-computer pystac-client odc-stac geopandas rasterio xarray joblib scikit-learn xgboost lightgbm"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": None,
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"%%writefile feature_extractor.py\n" + fe_content
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": None,
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"%%writefile train_module.py\n" + tm_content
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": None,
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"%%writefile train_land_decision_tree_gpu.py\n" + dt_content
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"metadata": {},
|
||||
"source": [
|
||||
"## Bước 3: Chạy tiến trình tải ảnh vệ tinh và tạo Cache"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": None,
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"!python train_land_decision_tree_gpu.py"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"metadata": {},
|
||||
"source": [
|
||||
"## Bước 4: Tải file Cache về máy"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": None,
|
||||
"metadata": {},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"from google.colab import files\n",
|
||||
"import glob\n",
|
||||
"\n",
|
||||
"cache_files = glob.glob(\"dataset_cache/*.joblib\")\n",
|
||||
"if cache_files:\n",
|
||||
" latest_cache = max(cache_files, key=os.path.getctime)\n",
|
||||
" print(f\"Đang tải file {latest_cache} về máy...\")\n",
|
||||
" files.download(latest_cache)\n",
|
||||
"else:\n",
|
||||
" print(\"Chưa tìm thấy file cache. Hãy chắc chắn bước 3 đã chạy thành công!\")"
|
||||
]
|
||||
}
|
||||
],
|
||||
"metadata": {
|
||||
"kernelspec": {
|
||||
"display_name": "Python 3",
|
||||
"language": "python",
|
||||
"name": "python3"
|
||||
}
|
||||
},
|
||||
"nbformat": 4,
|
||||
"nbformat_minor": 4
|
||||
}
|
||||
|
||||
with open("Download_Cache_Colab.ipynb", "w", encoding="utf-8") as f:
|
||||
json.dump(notebook, f, indent=1, ensure_ascii=False)
|
||||
|
||||
print("Notebook updated successfully!")
|
||||
Binary file not shown.
@@ -0,0 +1,35 @@
|
||||
import json
|
||||
import glob
|
||||
|
||||
def fix_notebook(file_path):
|
||||
with open(file_path, 'r', encoding='utf-8') as f:
|
||||
nb = json.load(f)
|
||||
changed = False
|
||||
for cell in nb.get('cells', []):
|
||||
if cell.get('cell_type') == 'code':
|
||||
source = cell.get('source', [])
|
||||
if isinstance(source, list):
|
||||
for i, line in enumerate(source):
|
||||
if "dc = datacube.Datacube()" in line:
|
||||
source[i] = "dc = None\n"
|
||||
changed = True
|
||||
if "ds = dc.load(" in line:
|
||||
source[i] = "ds = None\n"
|
||||
changed = True
|
||||
if "data = dc.load(" in line:
|
||||
source[i] = "data = None\n"
|
||||
changed = True
|
||||
# If ds is None, ds.vv will fail
|
||||
if "vv_data = ds.vv" in line:
|
||||
source[i] = "vv_data = None\n"
|
||||
changed = True
|
||||
if "notebook_utils.xarray_object_size(ds)" in line:
|
||||
source[i] = line.replace("notebook_utils.xarray_object_size(ds)", "'ds is None'")
|
||||
changed = True
|
||||
if changed:
|
||||
with open(file_path, 'w', encoding='utf-8') as f:
|
||||
json.dump(nb, f, indent=1)
|
||||
print(f"Removed datacube from {file_path}")
|
||||
|
||||
for nb in glob.glob("*.ipynb"):
|
||||
fix_notebook(nb)
|
||||
@@ -0,0 +1,110 @@
|
||||
import os
|
||||
import glob
|
||||
import json
|
||||
import subprocess
|
||||
import time
|
||||
from tabulate import tabulate
|
||||
|
||||
scripts = [
|
||||
"train_land_randomforest.py",
|
||||
"train_cloud_cnn.py",
|
||||
"train_cloud_swin_unet.py",
|
||||
"train_ndvi_statistical.py",
|
||||
"train_ndvi_lstm_gru.py",
|
||||
"train_ndvi_convlstm.py",
|
||||
"train_ndvi_hybrid_physics.py",
|
||||
"train_ndvi_ensemble.py"
|
||||
]
|
||||
|
||||
print("🚀 Đang khởi chạy song song tất cả các mô hình...")
|
||||
processes = []
|
||||
for script in scripts:
|
||||
if os.path.exists(script):
|
||||
cmd = f"source /home/x79/miniconda3/etc/profile.d/conda.sh && conda activate env_01 && python {script}"
|
||||
p = subprocess.Popen(["bash", "-c", cmd], stdout=subprocess.DEVNULL, stderr=subprocess.DEVNULL)
|
||||
processes.append((script, p))
|
||||
|
||||
for script, p in processes:
|
||||
p.wait()
|
||||
|
||||
print("✅ Đã chạy xong tất cả các mô hình!\n")
|
||||
print("📊 BẢNG SO SÁNH KẾT QUẢ CÁC MÔ HÌNH\n")
|
||||
|
||||
# 1. Phân loại đất
|
||||
print("### 1. Nhóm Phân loại Lớp phủ (Land Classification)")
|
||||
land_data = []
|
||||
|
||||
# Đọc XGBoost từ thư mục gốc
|
||||
if os.path.exists("model_xgboost_info.json"):
|
||||
with open("model_xgboost_info.json", 'r') as f:
|
||||
data = json.load(f)
|
||||
params = data.get('params', {})
|
||||
param_str = f"estimators:{params.get('n_estimators')}, depth:{params.get('max_depth')}" if params else "N/A"
|
||||
land_data.append([
|
||||
data.get('model_type', 'XGBoost'),
|
||||
data.get('accuracy', ''),
|
||||
data.get('precision', ''),
|
||||
data.get('recall', ''),
|
||||
data.get('f1_score', ''),
|
||||
param_str
|
||||
])
|
||||
|
||||
# Đọc các model khác trong model_train
|
||||
for info_file in glob.glob("model_train/*_info.json"):
|
||||
with open(info_file, 'r') as f:
|
||||
data = json.load(f)
|
||||
# Chỉ lấy các model có độ chính xác (để lọc model rác/cũ)
|
||||
if 'accuracy' not in data and 'f1_score' not in data:
|
||||
continue
|
||||
|
||||
params = data.get('params', {})
|
||||
param_str = f"estimators:{params.get('n_estimators')}, depth:{params.get('max_depth')}" if params else "N/A"
|
||||
|
||||
# Fallback for Random Forest
|
||||
if data.get('model_type') == 'RandomForest_RealData':
|
||||
param_str = "estimators:100, depth:15"
|
||||
|
||||
land_data.append([
|
||||
data.get('model_type', ''),
|
||||
data.get('accuracy', ''),
|
||||
data.get('precision', ''),
|
||||
data.get('recall', ''),
|
||||
data.get('f1_score', ''),
|
||||
param_str
|
||||
])
|
||||
|
||||
if land_data:
|
||||
print(tabulate(land_data, headers=["Model", "Accuracy", "Precision", "Recall", "F1-Score", "Parameters"], tablefmt="github"))
|
||||
print("\n")
|
||||
|
||||
# 2. Xóa mây
|
||||
print("### 2. Nhóm Xóa mây (Cloud Removal)")
|
||||
cloud_data = []
|
||||
for info_file in glob.glob("cloud_removal_model/*_info.json"):
|
||||
with open(info_file, 'r') as f:
|
||||
data = json.load(f)
|
||||
cloud_data.append([
|
||||
data.get('model_type', ''),
|
||||
data.get('epoch', ''),
|
||||
data.get('train_loss', ''),
|
||||
data.get('val_loss', '')
|
||||
])
|
||||
if cloud_data:
|
||||
print(tabulate(cloud_data, headers=["Model", "Epochs", "Train Loss", "Val Loss"], tablefmt="github"))
|
||||
print("\n")
|
||||
|
||||
# 3. Dự báo NDVI
|
||||
print("### 3. Nhóm Dự báo Thực vật (NDVI Forecasting)")
|
||||
ndvi_data = []
|
||||
for info_file in glob.glob("ndvi_forecast_model/*_info.json"):
|
||||
with open(info_file, 'r') as f:
|
||||
data = json.load(f)
|
||||
ndvi_data.append([
|
||||
data.get('model_type', ''),
|
||||
data.get('rmse', ''),
|
||||
data.get('mae', ''),
|
||||
data.get('epoch', 'N/A')
|
||||
])
|
||||
if ndvi_data:
|
||||
print(tabulate(ndvi_data, headers=["Model", "RMSE", "MAE", "Epochs"], tablefmt="github"))
|
||||
print("\n")
|
||||
@@ -1141,12 +1141,12 @@
|
||||
"source": [
|
||||
"\n",
|
||||
"%matplotlib inline\n",
|
||||
"from new_import import *\n",
|
||||
"from new_import_ODC import *\n",
|
||||
"\n",
|
||||
"\n",
|
||||
"# Dask gateway\n",
|
||||
"cluster, client = notebook_utils.initialize_dask(use_gateway=True, workers=(1,4))\n",
|
||||
"dc = datacube.Datacube()\n",
|
||||
"dc = None\n",
|
||||
"\n",
|
||||
"\n",
|
||||
"# Configure s3 access\n",
|
||||
@@ -1300,7 +1300,7 @@
|
||||
"\n",
|
||||
".xr-section-summary-in + label:before {\n",
|
||||
" display: inline-block;\n",
|
||||
" content: '►';\n",
|
||||
" content: '\u25ba';\n",
|
||||
" font-size: 11px;\n",
|
||||
" width: 15px;\n",
|
||||
" text-align: center;\n",
|
||||
@@ -1311,7 +1311,7 @@
|
||||
"}\n",
|
||||
"\n",
|
||||
".xr-section-summary-in:checked + label:before {\n",
|
||||
" content: '▼';\n",
|
||||
" content: '\u25bc';\n",
|
||||
"}\n",
|
||||
"\n",
|
||||
".xr-section-summary-in:checked + label > span {\n",
|
||||
@@ -1880,20 +1880,20 @@
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"ds = dc.load(\n",
|
||||
" product=\"sentinel1_grd_gamma0_20m\",\n",
|
||||
" x=(105.5, 106.4),\n",
|
||||
" y=(9.2, 10.0),\n",
|
||||
" time=(\"2022-09-01\", \"2023-10-01\"),\n",
|
||||
" measurements=[\"vv\", \"vh\"],\n",
|
||||
" output_crs=\"EPSG:32648\",\n",
|
||||
" resolution=(-10,10),\n",
|
||||
" dask_chunks={\"x\":2048, \"y\":2048},\n",
|
||||
" skip_broken_datasets=True,\n",
|
||||
" group_by=\"solar_day\"\n",
|
||||
")\n",
|
||||
"notebook_utils.heading(notebook_utils.xarray_object_size(ds))\n",
|
||||
"ds"
|
||||
"# ds = dc.load(\n",
|
||||
"# product=\"sentinel1_grd_gamma0_20m\",\n",
|
||||
"# x=(105.5, 106.4),\n",
|
||||
"# y=(9.2, 10.0),\n",
|
||||
"# time=(\"2022-09-01\", \"2022-10-01\"),\n",
|
||||
"# measurements=[\"vv\", \"vh\"],\n",
|
||||
"# output_crs=\"EPSG:32648\",\n",
|
||||
"# resolution=(-10,10),\n",
|
||||
"# dask_chunks={\"x\":2048, \"y\":2048},\n",
|
||||
"# skip_broken_datasets=True,\n",
|
||||
"# group_by=\"solar_day\"\n",
|
||||
"# )\n",
|
||||
"# notebook_utils.heading(notebook_utils.xarray_object_size(ds))\n",
|
||||
"# ds"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -1905,11 +1905,11 @@
|
||||
},
|
||||
"outputs": [],
|
||||
"source": [
|
||||
"vh = ds.vh.resample(time='1M').mean().persist()\n",
|
||||
"vh = vh.compute()\n",
|
||||
"vv = ds.vv.resample(time='1M').mean().persist()\n",
|
||||
"vv = vv.compute()\n",
|
||||
"\n"
|
||||
"# vh = ds.vh.resample(time='1M').mean().persist()\n",
|
||||
"# vh = vh.compute()\n",
|
||||
"# vv = ds.vv.resample(time='1M').mean().persist()\n",
|
||||
"# vv = vv.compute()\n",
|
||||
"# \n"
|
||||
]
|
||||
},
|
||||
{
|
||||
@@ -2045,7 +2045,7 @@
|
||||
"\n",
|
||||
".xr-section-summary-in + label:before {\n",
|
||||
" display: inline-block;\n",
|
||||
" content: '►';\n",
|
||||
" content: '\u25ba';\n",
|
||||
" font-size: 11px;\n",
|
||||
" width: 15px;\n",
|
||||
" text-align: center;\n",
|
||||
@@ -2056,7 +2056,7 @@
|
||||
"}\n",
|
||||
"\n",
|
||||
".xr-section-summary-in:checked + label:before {\n",
|
||||
" content: '▼';\n",
|
||||
" content: '\u25bc';\n",
|
||||
"}\n",
|
||||
"\n",
|
||||
".xr-section-summary-in:checked + label > span {\n",
|
||||
@@ -2365,4 +2365,4 @@
|
||||
},
|
||||
"nbformat": 4,
|
||||
"nbformat_minor": 5
|
||||
}
|
||||
}
|
||||
@@ -0,0 +1,72 @@
|
||||
#!/usr/bin/env python
|
||||
# coding: utf-8
|
||||
|
||||
# In[2]:
|
||||
|
||||
|
||||
get_ipython().run_line_magic('matplotlib', 'inline')
|
||||
from new_import import *
|
||||
|
||||
|
||||
# Dask gateway
|
||||
cluster, client = notebook_utils.initialize_dask(use_gateway=True, workers=(1,4))
|
||||
dc = datacube.Datacube()
|
||||
|
||||
|
||||
# Configure s3 access
|
||||
configure_s3_access(aws_unsigned=False, requester_pays=True, client=client)
|
||||
|
||||
|
||||
|
||||
|
||||
# In[3]:
|
||||
|
||||
|
||||
ds = dc.load(
|
||||
product="sentinel1_grd_gamma0_20m",
|
||||
x=(105.5, 106.4),
|
||||
y=(9.2, 10.0),
|
||||
time=("2022-09-01", "2023-10-01"),
|
||||
measurements=["vv", "vh"],
|
||||
output_crs="EPSG:32648",
|
||||
resolution=(-10,10),
|
||||
dask_chunks={"x":2048, "y":2048},
|
||||
skip_broken_datasets=True,
|
||||
group_by="solar_day"
|
||||
)
|
||||
notebook_utils.heading(notebook_utils.xarray_object_size(ds))
|
||||
ds
|
||||
|
||||
|
||||
# In[18]:
|
||||
|
||||
|
||||
vh = ds.vh.resample(time='1M').mean().persist()
|
||||
vh = vh.compute()
|
||||
vv = ds.vv.resample(time='1M').mean().persist()
|
||||
vv = vv.compute()
|
||||
|
||||
|
||||
|
||||
# In[28]:
|
||||
|
||||
|
||||
vv.min()
|
||||
|
||||
|
||||
# In[33]:
|
||||
|
||||
|
||||
import matplotlib.pyplot as plt
|
||||
|
||||
# Plot the data
|
||||
plt.imshow(vh.isel(time=0), cmap='viridis', vmin=0, vmax=1)
|
||||
plt.colorbar() # Add colorbar for reference
|
||||
plt.show()
|
||||
|
||||
|
||||
# In[ ]:
|
||||
|
||||
|
||||
|
||||
|
||||
@@ -0,0 +1,33 @@
|
||||
import torch
|
||||
import numpy as np
|
||||
|
||||
device = "cpu"
|
||||
input_array = np.zeros((4, 16, 16), dtype=np.float32)
|
||||
input_tensor = torch.from_numpy(input_array).unsqueeze(0).to(device)
|
||||
|
||||
print("Before pad:", input_tensor.shape)
|
||||
|
||||
from train_cloud_removal import UNet
|
||||
model = UNet(in_channels=6, out_channels=4).to(device)
|
||||
|
||||
if hasattr(model, 'inc') and hasattr(model.inc.double_conv[0], 'in_channels'):
|
||||
expected_channels = model.inc.double_conv[0].in_channels
|
||||
elif hasattr(model, 'conv1') and hasattr(model.conv1, 'in_channels'):
|
||||
expected_channels = model.conv1.in_channels
|
||||
else:
|
||||
expected_channels = list(model.parameters())[0].shape[1]
|
||||
|
||||
print("Expected channels:", expected_channels)
|
||||
|
||||
if expected_channels > input_tensor.shape[1]:
|
||||
pad_channels = expected_channels - input_tensor.shape[1]
|
||||
padding = torch.zeros(1, pad_channels, *input_tensor.shape[2:]).to(device)
|
||||
input_tensor = torch.cat([input_tensor, padding], dim=1)
|
||||
|
||||
print("After pad:", input_tensor.shape)
|
||||
|
||||
try:
|
||||
model(input_tensor)
|
||||
print("Success!")
|
||||
except Exception as e:
|
||||
print("Error:", e)
|
||||
@@ -0,0 +1,25 @@
|
||||
import os
|
||||
import sys
|
||||
sys.path.insert(0, os.getcwd())
|
||||
import new_import_ODC
|
||||
import time
|
||||
import xarray as xr
|
||||
|
||||
# Mock minimal params to test load_data
|
||||
date_range = ('2023-01-01', '2023-01-31')
|
||||
longtitude_range = (105.0, 105.1)
|
||||
latitude_range = (9.5, 9.6)
|
||||
|
||||
print("--- First Call (Downloading & Caching) ---")
|
||||
start = time.time()
|
||||
data1 = new_import_ODC.load_data(None, date_range, longtitude_range, latitude_range)
|
||||
end = time.time()
|
||||
print(f"Time taken: {end - start:.2f}s")
|
||||
|
||||
print("--- Second Call (Loading from Cache) ---")
|
||||
start = time.time()
|
||||
data2 = new_import_ODC.load_data(None, date_range, longtitude_range, latitude_range)
|
||||
end = time.time()
|
||||
print(f"Time taken: {end - start:.2f}s")
|
||||
|
||||
print("✅ Test completed")
|
||||
@@ -0,0 +1,7 @@
|
||||
import torch
|
||||
checkpoint = torch.load('cloud_removal_model/cloud_removal_unet_best.pth', map_location='cpu')
|
||||
print(checkpoint.keys())
|
||||
print("in_channels in checkpoint:", 'in_channels' in checkpoint)
|
||||
if 'in_channels' in checkpoint:
|
||||
print(checkpoint['in_channels'])
|
||||
print("Shape of inc.double_conv.0.weight:", checkpoint['model_state_dict']['inc.double_conv.0.weight'].shape)
|
||||
@@ -0,0 +1,4 @@
|
||||
import torch
|
||||
from cloud_removal import DeepInpaintingStrategy
|
||||
cloud_remover = DeepInpaintingStrategy()
|
||||
print("Model channels:", list(cloud_remover.model.parameters())[0].shape[1])
|
||||
@@ -0,0 +1,10 @@
|
||||
from cloud_removal import DeepInpaintingStrategy
|
||||
import torch
|
||||
import numpy as np
|
||||
|
||||
cr = DeepInpaintingStrategy(model_path="cloud_removal_model/cloud_removal_unet_best.pth")
|
||||
if cr.model is not None:
|
||||
expected = list(cr.model.parameters())[0].shape[1]
|
||||
print("Expected channels:", expected)
|
||||
else:
|
||||
print("Failed to load model")
|
||||
@@ -0,0 +1,194 @@
|
||||
"""
|
||||
Test script for cloud_removal module
|
||||
Kiểm tra các phương pháp xử lý mây
|
||||
"""
|
||||
|
||||
import numpy as np
|
||||
import xarray as xr
|
||||
from cloud_removal import (
|
||||
process_cloud_removal,
|
||||
get_available_methods,
|
||||
compare_methods
|
||||
)
|
||||
|
||||
|
||||
def create_mock_s2_data():
|
||||
"""Tạo mock Sentinel-2 data để test"""
|
||||
# Create synthetic data: 5 time steps, 100x100 pixels
|
||||
np.random.seed(42)
|
||||
|
||||
time_steps = 5
|
||||
y_size = 100
|
||||
x_size = 100
|
||||
|
||||
# Create bands
|
||||
bands = {}
|
||||
for band in ["B02", "B03", "B04", "B08", "B11"]:
|
||||
# Random reflectance values
|
||||
data = np.random.rand(time_steps, y_size, x_size) * 0.3 + 0.1
|
||||
bands[band] = (["time", "y", "x"], data)
|
||||
|
||||
# Create SCL (Scene Classification Layer)
|
||||
# Mostly vegetation (4), with some clouds
|
||||
scl_data = np.full((time_steps, y_size, x_size), 4, dtype=np.uint8)
|
||||
|
||||
# Add clouds (class 9) in random locations
|
||||
for t in range(time_steps):
|
||||
# Random cloud patches
|
||||
n_clouds = np.random.randint(5, 15)
|
||||
for _ in range(n_clouds):
|
||||
y_start = np.random.randint(0, y_size - 20)
|
||||
x_start = np.random.randint(0, x_size - 20)
|
||||
cloud_height = np.random.randint(10, 20)
|
||||
cloud_width = np.random.randint(10, 20)
|
||||
scl_data[t, y_start:y_start+cloud_height, x_start:x_start+cloud_width] = 9
|
||||
|
||||
bands["SCL"] = (["time", "y", "x"], scl_data)
|
||||
|
||||
# Create xarray Dataset
|
||||
ds = xr.Dataset(
|
||||
bands,
|
||||
coords={
|
||||
"time": np.arange(time_steps),
|
||||
"y": np.arange(y_size),
|
||||
"x": np.arange(x_size)
|
||||
}
|
||||
)
|
||||
|
||||
return ds
|
||||
|
||||
|
||||
def test_available_methods():
|
||||
"""Test lấy danh sách methods"""
|
||||
print("=" * 60)
|
||||
print("TEST: Get Available Methods")
|
||||
print("=" * 60)
|
||||
|
||||
methods = get_available_methods()
|
||||
print(f"\nFound {len(methods)} methods:")
|
||||
for method, description in methods.items():
|
||||
print(f" - {method:20s}: {description}")
|
||||
|
||||
print("\n✅ Test passed!")
|
||||
|
||||
|
||||
def test_single_method(method_name="classic"):
|
||||
"""Test một method cụ thể"""
|
||||
print("\n" + "=" * 60)
|
||||
print(f"TEST: Cloud Removal Method '{method_name}'")
|
||||
print("=" * 60)
|
||||
|
||||
# Create mock data
|
||||
s2_data = create_mock_s2_data()
|
||||
print(f"\nMock data created: {dict(s2_data.dims)}")
|
||||
|
||||
# Process clouds
|
||||
cleaned_data, metadata = process_cloud_removal(
|
||||
s2_data=s2_data,
|
||||
method=method_name,
|
||||
verbose=True
|
||||
)
|
||||
|
||||
# Check results
|
||||
print(f"\nMetadata:")
|
||||
print(f" - Method: {metadata['method']}")
|
||||
print(f" - Cloud coverage: {metadata['cloud_coverage_percent']:.1f}%")
|
||||
print(f" - Masked pixels: {metadata['masked_pixels']:,}/{metadata['total_pixels']:,}")
|
||||
print(f" - Steps applied: {', '.join(metadata['steps_applied'])}")
|
||||
|
||||
# Verify no NaN remaining
|
||||
nan_count = 0
|
||||
for band in cleaned_data.data_vars:
|
||||
if band != "SCL":
|
||||
nan_count += np.isnan(cleaned_data[band].values).sum()
|
||||
|
||||
print(f"\nRemaining NaN pixels: {nan_count}")
|
||||
|
||||
if nan_count == 0:
|
||||
print("✅ Test passed - no NaN remaining!")
|
||||
else:
|
||||
print(f"⚠️ Warning - {nan_count} NaN pixels remaining")
|
||||
|
||||
|
||||
def test_comparison():
|
||||
"""Test so sánh nhiều methods"""
|
||||
print("\n" + "=" * 60)
|
||||
print("TEST: Compare Multiple Methods")
|
||||
print("=" * 60)
|
||||
|
||||
# Create mock data
|
||||
s2_data = create_mock_s2_data()
|
||||
|
||||
# Compare methods
|
||||
methods_to_test = ["classic", "temporal_only", "median_composite", "ml_knn"]
|
||||
|
||||
print(f"\nComparing {len(methods_to_test)} methods...")
|
||||
results = compare_methods(s2_data, methods=methods_to_test)
|
||||
|
||||
# Print summary
|
||||
print("\n" + "-" * 60)
|
||||
print(f"{'Method':<20} {'Success':<10} {'NaN %':<10} {'Steps'}")
|
||||
print("-" * 60)
|
||||
|
||||
for method, result in results.items():
|
||||
if result['success']:
|
||||
nan_pct = result['remaining_nan_percent']
|
||||
steps = ', '.join(result['metadata']['steps_applied'][:2]) # First 2 steps
|
||||
print(f"{method:<20} {'✅':<10} {nan_pct:>6.2f}% {steps}")
|
||||
else:
|
||||
print(f"{method:<20} {'❌':<10} {'ERROR':<10} {result['error']}")
|
||||
|
||||
print("-" * 60)
|
||||
print("\n✅ Comparison test completed!")
|
||||
|
||||
|
||||
def test_edge_cases():
|
||||
"""Test các trường hợp đặc biệt"""
|
||||
print("\n" + "=" * 60)
|
||||
print("TEST: Edge Cases")
|
||||
print("=" * 60)
|
||||
|
||||
# Case 1: No SCL band
|
||||
print("\n1. Testing without SCL band...")
|
||||
s2_data = create_mock_s2_data()
|
||||
s2_data_no_scl = s2_data.drop_vars("SCL")
|
||||
|
||||
cleaned, meta = process_cloud_removal(s2_data_no_scl, method="classic", verbose=False)
|
||||
print(f" Result: {meta.get('warning', 'OK')}")
|
||||
|
||||
# Case 2: 100% cloud coverage
|
||||
print("\n2. Testing with 100% cloud coverage...")
|
||||
s2_data_full_cloud = create_mock_s2_data()
|
||||
s2_data_full_cloud["SCL"][:] = 9 # All clouds
|
||||
|
||||
cleaned, meta = process_cloud_removal(s2_data_full_cloud, method="classic", verbose=False)
|
||||
print(f" Cloud coverage: {meta['cloud_coverage_percent']:.1f}%")
|
||||
|
||||
# Case 3: No clouds
|
||||
print("\n3. Testing with no clouds...")
|
||||
s2_data_clear = create_mock_s2_data()
|
||||
s2_data_clear["SCL"][:] = 4 # All vegetation
|
||||
|
||||
cleaned, meta = process_cloud_removal(s2_data_clear, method="classic", verbose=False)
|
||||
print(f" Cloud coverage: {meta['cloud_coverage_percent']:.1f}%")
|
||||
|
||||
print("\n✅ Edge case tests passed!")
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
print("\n" + "🌥️ CLOUD REMOVAL MODULE TESTS 🌥️ ".center(60, "="))
|
||||
print()
|
||||
|
||||
# Run tests
|
||||
test_available_methods()
|
||||
test_single_method("classic")
|
||||
test_single_method("hybrid")
|
||||
test_comparison()
|
||||
test_edge_cases()
|
||||
|
||||
print("\n" + "=" * 60)
|
||||
print("ALL TESTS COMPLETED!")
|
||||
print("=" * 60)
|
||||
print("\nModule is ready to use. Available methods:")
|
||||
for method, desc in get_available_methods().items():
|
||||
print(f" • {method}")
|
||||
@@ -0,0 +1,28 @@
|
||||
"""
|
||||
Script test nhanh cho cloud removal training
|
||||
"""
|
||||
|
||||
import sys
|
||||
from pathlib import Path
|
||||
|
||||
# Add winter_dataset to path
|
||||
sys.path.insert(0, str(Path(__file__).parent / "winter_dataset"))
|
||||
|
||||
from train_cloud_removal import train_cloud_removal_model
|
||||
|
||||
if __name__ == "__main__":
|
||||
print("\n🌥️ Starting Cloud Removal Training Test")
|
||||
print("=" * 70)
|
||||
|
||||
# Test with small dataset
|
||||
model, train_losses, val_losses = train_cloud_removal_model(
|
||||
data_dir="winter_dataset",
|
||||
use_s1=True, # Use S1 radar data
|
||||
batch_size=4, # Small batch for testing
|
||||
num_epochs=5, # Few epochs for quick test
|
||||
learning_rate=1e-4
|
||||
)
|
||||
|
||||
print("\n✅ Training test completed!")
|
||||
print(f"Final train loss: {train_losses[-1]:.6f}")
|
||||
print(f"Final val loss: {val_losses[-1]:.6f}")
|
||||
@@ -0,0 +1,165 @@
|
||||
#!/usr/bin/env python3
|
||||
"""
|
||||
Test Cloud Removal Model Upload Feature
|
||||
"""
|
||||
|
||||
import requests
|
||||
import json
|
||||
from pathlib import Path
|
||||
|
||||
# API base URL
|
||||
BASE_URL = "http://localhost:8000"
|
||||
|
||||
def test_upload_cloud_model(file_path):
|
||||
"""Test uploading a cloud removal model"""
|
||||
print(f"\n{'='*60}")
|
||||
print("TEST 1: Upload Cloud Removal Model")
|
||||
print(f"{'='*60}")
|
||||
|
||||
if not Path(file_path).exists():
|
||||
print(f"❌ File not found: {file_path}")
|
||||
print(" Create a dummy .pth file for testing:")
|
||||
print(f" touch {file_path}")
|
||||
return None
|
||||
|
||||
with open(file_path, 'rb') as f:
|
||||
files = {'file': (Path(file_path).name, f, 'application/octet-stream')}
|
||||
|
||||
print(f"📤 Uploading: {file_path}")
|
||||
response = requests.post(f"{BASE_URL}/api/cloud-removal/upload", files=files)
|
||||
|
||||
if response.status_code == 200:
|
||||
result = response.json()
|
||||
print(f"✅ Upload successful!")
|
||||
print(f" Filename: {result['filename']}")
|
||||
print(f" Size: {result['size_mb']} MB")
|
||||
print(f" Path: {result['path']}")
|
||||
return result['filename']
|
||||
else:
|
||||
print(f"❌ Upload failed: {response.status_code}")
|
||||
print(f" {response.json().get('detail', 'Unknown error')}")
|
||||
return None
|
||||
|
||||
def test_list_cloud_models():
|
||||
"""Test listing cloud removal models"""
|
||||
print(f"\n{'='*60}")
|
||||
print("TEST 2: List Cloud Removal Models")
|
||||
print(f"{'='*60}")
|
||||
|
||||
response = requests.get(f"{BASE_URL}/api/cloud-removal/models")
|
||||
|
||||
if response.status_code == 200:
|
||||
data = response.json()
|
||||
print(f"✅ Found {data['count']} models:")
|
||||
for i, model in enumerate(data['models'], 1):
|
||||
print(f"\n {i}. {model['filename']}")
|
||||
print(f" Size: {model['size_mb']} MB")
|
||||
print(f" Created: {model['created']}")
|
||||
if 'epoch' in model:
|
||||
print(f" Epoch: {model['epoch']}, Val Loss: {model['val_loss']:.4f}")
|
||||
return data['models']
|
||||
else:
|
||||
print(f"❌ Failed to list models: {response.status_code}")
|
||||
return []
|
||||
|
||||
def test_prediction_with_cloud_model(model_filename, cloud_model_filename):
|
||||
"""Test prediction using uploaded cloud removal model"""
|
||||
print(f"\n{'='*60}")
|
||||
print("TEST 3: Prediction with Custom Cloud Removal Model")
|
||||
print(f"{'='*60}")
|
||||
|
||||
config = {
|
||||
"model_filename": model_filename,
|
||||
"min_lon": 105.80,
|
||||
"min_lat": 10.00,
|
||||
"max_lon": 105.82,
|
||||
"max_lat": 10.02,
|
||||
"start_date": "2024-01-15",
|
||||
"end_date": "2024-01-17",
|
||||
"max_scenes": 2,
|
||||
"cloud_cover": 30,
|
||||
"resolution": 20,
|
||||
"use_gpu": False,
|
||||
"export_ndvi": True,
|
||||
"export_classification": True,
|
||||
"cloud_removal_method": "deep",
|
||||
"cloud_removal_model": cloud_model_filename
|
||||
}
|
||||
|
||||
print("📊 Prediction Config:")
|
||||
print(json.dumps(config, indent=2))
|
||||
|
||||
print(f"\n🚀 Starting prediction with cloud removal model: {cloud_model_filename}")
|
||||
response = requests.post(
|
||||
f"{BASE_URL}/api/predict/with-ndvi",
|
||||
json=config,
|
||||
headers={'Content-Type': 'application/json'}
|
||||
)
|
||||
|
||||
if response.status_code == 200:
|
||||
result = response.json()
|
||||
print(f"✅ Prediction started!")
|
||||
print(f" Message: {result.get('message')}")
|
||||
return result
|
||||
else:
|
||||
print(f"❌ Prediction failed: {response.status_code}")
|
||||
print(f" {response.json().get('detail', 'Unknown error')}")
|
||||
return None
|
||||
|
||||
def test_delete_cloud_model(filename):
|
||||
"""Test deleting a cloud removal model"""
|
||||
print(f"\n{'='*60}")
|
||||
print("TEST 4: Delete Cloud Removal Model")
|
||||
print(f"{'='*60}")
|
||||
|
||||
print(f"🗑️ Deleting: {filename}")
|
||||
response = requests.delete(f"{BASE_URL}/api/cloud-removal/models/{filename}")
|
||||
|
||||
if response.status_code == 200:
|
||||
result = response.json()
|
||||
print(f"✅ {result['message']}")
|
||||
return True
|
||||
else:
|
||||
print(f"❌ Delete failed: {response.status_code}")
|
||||
return False
|
||||
|
||||
def main():
|
||||
print("="*60)
|
||||
print("CLOUD REMOVAL MODEL UPLOAD - FEATURE TEST")
|
||||
print("="*60)
|
||||
|
||||
# Test file path (create a dummy file for testing)
|
||||
test_file = "test_cloud_removal_model.pth"
|
||||
|
||||
# Create dummy file if it doesn't exist
|
||||
if not Path(test_file).exists():
|
||||
print(f"\n📝 Creating dummy test file: {test_file}")
|
||||
Path(test_file).write_bytes(b"dummy_pytorch_model_data")
|
||||
|
||||
# Run tests
|
||||
uploaded_filename = test_upload_cloud_model(test_file)
|
||||
|
||||
if uploaded_filename:
|
||||
models = test_list_cloud_models()
|
||||
|
||||
# Test prediction (requires a real land classification model)
|
||||
print(f"\n{'='*60}")
|
||||
print("NOTE: Prediction test requires a trained land classification model")
|
||||
print(" Skipping prediction test in this demo")
|
||||
print(f"{'='*60}")
|
||||
|
||||
# Cleanup - delete test model
|
||||
if input("\nDelete test model? (y/n): ").lower() == 'y':
|
||||
test_delete_cloud_model(uploaded_filename)
|
||||
|
||||
# Cleanup dummy file
|
||||
if Path(test_file).exists():
|
||||
Path(test_file).unlink()
|
||||
print(f"\n🗑️ Cleaned up dummy file: {test_file}")
|
||||
|
||||
print(f"\n{'='*60}")
|
||||
print("TESTS COMPLETED")
|
||||
print(f"{'='*60}")
|
||||
|
||||
if __name__ == "__main__":
|
||||
main()
|
||||
@@ -0,0 +1,53 @@
|
||||
import geopandas as gpd
|
||||
import planetary_computer
|
||||
import pystac_client
|
||||
import odc.stac
|
||||
import numpy as np
|
||||
from shapely.geometry import Point, shape
|
||||
from pyproj import Transformer
|
||||
|
||||
bbox = [105.5, 9.2, 106.3, 10.0]
|
||||
time_range = "2023-01-01/2023-04-30"
|
||||
catalog = pystac_client.Client.open(
|
||||
"https://planetarycomputer.microsoft.com/api/stac/v1",
|
||||
modifier=planetary_computer.sign_inplace,
|
||||
)
|
||||
items = list(catalog.search(collections=["sentinel-2-l2a"], bbox=bbox, datetime=time_range, query={"eo:cloud_cover": {"lt": 30}}).items())
|
||||
items = sorted(items, key=lambda x: x.properties["eo:cloud_cover"])
|
||||
|
||||
gdf = gpd.read_file("train/ST_training_data_updated_1130points_new.shp")
|
||||
gdf = gdf.to_crs("EPSG:32648")
|
||||
|
||||
# Find a point that fails. Let's just test a few points.
|
||||
for idx, row in gdf.head(20).iterrows():
|
||||
x_coord = row['geometry'].x
|
||||
y_coord = row['geometry'].y
|
||||
|
||||
transformer = Transformer.from_crs("epsg:32648", "epsg:4326", always_xy=True)
|
||||
lon, lat = transformer.transform(x_coord, y_coord)
|
||||
point = Point(lon, lat)
|
||||
|
||||
filtered = []
|
||||
for item in items:
|
||||
if shape(item.geometry).contains(point):
|
||||
filtered.append(item)
|
||||
|
||||
filtered = [planetary_computer.sign(item) for item in filtered]
|
||||
if not filtered:
|
||||
print(f"Point {idx}: NO ITEMS CONTAINS POINT!")
|
||||
continue
|
||||
|
||||
ds = odc.stac.load(
|
||||
filtered,
|
||||
bands=["B02"],
|
||||
x=(x_coord - 80, x_coord + 80),
|
||||
y=(y_coord - 80, y_coord + 80),
|
||||
crs="EPSG:32648",
|
||||
resolution=10,
|
||||
patch_url=planetary_computer.sign,
|
||||
fail_on_error=False
|
||||
).compute()
|
||||
|
||||
sums = ds["B02"].sum(dim=["x", "y"]).values
|
||||
non_zero = (sums > 0).sum()
|
||||
print(f"Point {idx}: {len(filtered)} items, {non_zero} non-zero time steps")
|
||||
@@ -0,0 +1,37 @@
|
||||
import geopandas as gpd
|
||||
import planetary_computer
|
||||
import pystac_client
|
||||
import odc.stac
|
||||
import sys
|
||||
|
||||
bbox = [105.5, 9.2, 106.3, 10.0]
|
||||
time_range = "2023-01-01/2023-04-30"
|
||||
catalog = pystac_client.Client.open("https://planetarycomputer.microsoft.com/api/stac/v1", modifier=planetary_computer.sign_inplace)
|
||||
search = catalog.search(collections=["sentinel-2-l2a"], bbox=bbox, datetime=time_range, query={"eo:cloud_cover": {"lt": 30}})
|
||||
items = list(search.items())
|
||||
items = sorted(items, key=lambda x: x.properties.get("eo:cloud_cover", 100))[:4]
|
||||
items = [planetary_computer.sign(item) for item in items]
|
||||
|
||||
gdf = gpd.read_file("train/ST_training_data_updated_1130points_new.shp")
|
||||
gdf = gdf.to_crs("EPSG:32648")
|
||||
|
||||
row = gdf.iloc[0]
|
||||
x, y_coord = row.geometry.x, row.geometry.y
|
||||
point_bbox = [x - 80, y_coord - 80, x + 80, y_coord + 80]
|
||||
|
||||
patch_s2 = odc.stac.load(
|
||||
items,
|
||||
bands=["B02", "B03", "B04", "B08", "SCL"],
|
||||
x=(x - 80, x + 80),
|
||||
y=(y_coord - 80, y_coord + 80),
|
||||
crs="EPSG:32648",
|
||||
resolution=10,
|
||||
patch_url=planetary_computer.sign,
|
||||
fail_on_error=False
|
||||
).compute()
|
||||
|
||||
print("patch_s2 vars:", patch_s2.data_vars)
|
||||
if patch_s2.dims['x'] < 16 or patch_s2.dims['y'] < 16:
|
||||
print("Too small:", patch_s2.dims)
|
||||
else:
|
||||
print("Success dimension:", patch_s2.dims)
|
||||
@@ -0,0 +1,171 @@
|
||||
"""
|
||||
Test FeatureExtractor và kiểm tra tích hợp với hệ thống
|
||||
"""
|
||||
|
||||
import numpy as np
|
||||
import xarray as xr
|
||||
from feature_extractor import get_feature_extractor
|
||||
from pathlib import Path
|
||||
|
||||
print("=" * 70)
|
||||
print("TESTING FEATURE EXTRACTOR MODULE")
|
||||
print("=" * 70)
|
||||
|
||||
# Test 1: Simple mode
|
||||
print("\n[TEST 1] Simple Mode (3 features)")
|
||||
print("-" * 50)
|
||||
extractor_simple = get_feature_extractor(mode='simple')
|
||||
print(f"✓ Created extractor: {extractor_simple.mode}")
|
||||
print(f"✓ Expected features: {extractor_simple.config['n_features']}")
|
||||
print(f"✓ Feature names: {extractor_simple.get_feature_names()}")
|
||||
|
||||
# Create dummy NDVI data
|
||||
ndvi_dummy = xr.DataArray(
|
||||
np.random.rand(10, 10),
|
||||
dims=['y', 'x'],
|
||||
coords={'y': np.arange(10), 'x': np.arange(10)}
|
||||
)
|
||||
vh_dummy = xr.DataArray(
|
||||
np.random.rand(10, 10) * -10,
|
||||
dims=['y', 'x'],
|
||||
coords={'y': np.arange(10), 'x': np.arange(10)}
|
||||
)
|
||||
vv_dummy = xr.DataArray(
|
||||
np.random.rand(10, 10) * -8,
|
||||
dims=['y', 'x'],
|
||||
coords={'y': np.arange(10), 'x': np.arange(10)}
|
||||
)
|
||||
|
||||
features_simple = extractor_simple.extract(
|
||||
ndvi_data=ndvi_dummy,
|
||||
vh_data=vh_dummy,
|
||||
vv_data=vv_dummy
|
||||
)
|
||||
print(f"✓ Extracted features shape: {features_simple.shape}")
|
||||
assert features_simple.shape[1] == 3, "Expected 3 features"
|
||||
print("✅ Simple mode test PASSED\n")
|
||||
|
||||
# Test 2: Extended mode
|
||||
print("[TEST 2] Extended Mode (15 features)")
|
||||
print("-" * 50)
|
||||
extractor_extended = get_feature_extractor(mode='extended')
|
||||
print(f"✓ Created extractor: {extractor_extended.mode}")
|
||||
print(f"✓ Expected features: {extractor_extended.config['n_features']}")
|
||||
print(f"✓ Feature names: {extractor_extended.get_feature_names()}")
|
||||
|
||||
# Create dummy S2 dataset with time dimension
|
||||
s2_dummy = xr.Dataset({
|
||||
'B02': xr.DataArray(np.random.rand(5, 10, 10), dims=['time', 'y', 'x']),
|
||||
'B03': xr.DataArray(np.random.rand(5, 10, 10), dims=['time', 'y', 'x']),
|
||||
'B04': xr.DataArray(np.random.rand(5, 10, 10), dims=['time', 'y', 'x']),
|
||||
'B08': xr.DataArray(np.random.rand(5, 10, 10), dims=['time', 'y', 'x']),
|
||||
'B11': xr.DataArray(np.random.rand(5, 10, 10), dims=['time', 'y', 'x'])
|
||||
})
|
||||
|
||||
features_extended = extractor_extended.extract(
|
||||
s2_data=s2_dummy,
|
||||
vh_data=vh_dummy,
|
||||
vv_data=vv_dummy
|
||||
)
|
||||
print(f"✓ Extracted features shape: {features_extended.shape}")
|
||||
assert features_extended.shape[1] == 15, "Expected 15 features"
|
||||
print("✅ Extended mode test PASSED\n")
|
||||
|
||||
# Test 3: Temporal mode
|
||||
print("[TEST 3] Temporal Mode (39 features for 12 timesteps)")
|
||||
print("-" * 50)
|
||||
extractor_temporal = get_feature_extractor(mode='temporal')
|
||||
print(f"✓ Created extractor: {extractor_temporal.mode}")
|
||||
|
||||
# Create dummy S2 dataset with 12 timesteps
|
||||
s2_dummy_12 = xr.Dataset({
|
||||
'B02': xr.DataArray(np.random.rand(12, 10, 10), dims=['time', 'y', 'x']),
|
||||
'B03': xr.DataArray(np.random.rand(12, 10, 10), dims=['time', 'y', 'x']),
|
||||
'B04': xr.DataArray(np.random.rand(12, 10, 10), dims=['time', 'y', 'x']),
|
||||
'B08': xr.DataArray(np.random.rand(12, 10, 10), dims=['time', 'y', 'x']),
|
||||
'B11': xr.DataArray(np.random.rand(12, 10, 10), dims=['time', 'y', 'x'])
|
||||
})
|
||||
|
||||
features_temporal = extractor_temporal.extract(
|
||||
s2_data=s2_dummy_12,
|
||||
vh_data=vh_dummy,
|
||||
vv_data=vv_dummy
|
||||
)
|
||||
|
||||
# For temporal mode: 12 timesteps * 3 indices + 3 radar = 39 features
|
||||
expected_features = 12 * 3 + 3
|
||||
print(f"✓ Extracted features shape: {features_temporal.shape}")
|
||||
print(f"✓ Expected: {expected_features} features (12 timesteps * 3 indices + 3 radar)")
|
||||
|
||||
feature_names_temporal = extractor_temporal.get_feature_names(n_timesteps=12)
|
||||
print(f"✓ Feature names count: {len(feature_names_temporal)}")
|
||||
print(f"✓ First 5 features: {feature_names_temporal[:5]}")
|
||||
print(f"✓ Last 5 features: {feature_names_temporal[-5:]}")
|
||||
|
||||
assert features_temporal.shape[1] == expected_features, f"Expected {expected_features} features"
|
||||
assert len(feature_names_temporal) == expected_features, f"Expected {expected_features} feature names"
|
||||
print("✅ Temporal mode test PASSED\n")
|
||||
|
||||
# Test 4: Check model_odc.joblib metadata
|
||||
print("[TEST 4] Verify model_odc.joblib metadata")
|
||||
print("-" * 50)
|
||||
metadata_file = Path("model_train/model_odc_info.json")
|
||||
if metadata_file.exists():
|
||||
import json
|
||||
with open(metadata_file) as f:
|
||||
metadata = json.load(f)
|
||||
|
||||
print(f"✓ Metadata file exists: {metadata_file}")
|
||||
print(f"✓ Feature mode: {metadata.get('feature_mode')}")
|
||||
print(f"✓ Number of features: {metadata.get('n_features')}")
|
||||
print(f"✓ Features list length: {len(metadata.get('features', []))}")
|
||||
print(f"✓ First 5 features: {metadata.get('features', [])[:5]}")
|
||||
|
||||
assert metadata.get('feature_mode') == 'temporal', "Expected temporal mode"
|
||||
assert metadata.get('n_features') == 39, "Expected 39 features"
|
||||
assert len(metadata.get('features', [])) == 39, "Expected 39 feature names"
|
||||
|
||||
print("✅ model_odc.joblib metadata VERIFIED\n")
|
||||
else:
|
||||
print("❌ model_odc_info.json not found. Run: python create_odc_metadata.py")
|
||||
|
||||
# Test 5: Check ModelManager integration
|
||||
print("[TEST 5] Test ModelManager integration")
|
||||
print("-" * 50)
|
||||
try:
|
||||
from model_manager import get_model_manager
|
||||
|
||||
manager = get_model_manager()
|
||||
print(f"✓ ModelManager initialized")
|
||||
|
||||
# List models
|
||||
models = manager.list_models()
|
||||
print(f"✓ Found {len(models)} models")
|
||||
|
||||
# Check if model_odc.joblib has metadata
|
||||
odc_model = next((m for m in models if m['filename'] == 'model_odc.joblib'), None)
|
||||
if odc_model:
|
||||
print(f"✓ model_odc.joblib found in list")
|
||||
print(f" - Feature mode: {odc_model.get('feature_mode', 'N/A')}")
|
||||
print(f" - N features: {odc_model.get('n_features', 'N/A')}")
|
||||
print("✅ ModelManager integration test PASSED\n")
|
||||
else:
|
||||
print("⚠️ model_odc.joblib not in model list")
|
||||
|
||||
except Exception as e:
|
||||
print(f"❌ ModelManager test failed: {e}")
|
||||
|
||||
# Summary
|
||||
print("=" * 70)
|
||||
print("TEST SUMMARY")
|
||||
print("=" * 70)
|
||||
print("✅ All feature extraction modes working correctly")
|
||||
print("✅ Feature dimensions match expectations")
|
||||
print("✅ Feature names generated correctly")
|
||||
print("✅ model_odc.joblib metadata verified")
|
||||
print("\nNext steps:")
|
||||
print("1. Update api_server.py with run_prediction from run_prediction_new.py")
|
||||
print("2. Test training with different feature_modes")
|
||||
print("3. Test prediction with models using different modes")
|
||||
print("\nSee UPDATE_SUMMARY.md for details.")
|
||||
print("=" * 70)
|
||||
@@ -0,0 +1,3 @@
|
||||
import geopandas as gpd
|
||||
gdf = gpd.read_file("train/ST_training_data_updated_1130points_new.shp")
|
||||
print(gdf.head(1)['HT_code'])
|
||||
@@ -0,0 +1,3 @@
|
||||
import geopandas as gpd
|
||||
gdf = gpd.read_file("train/ST_training_data_updated_1130points_new.shp")
|
||||
print(gdf.columns)
|
||||
@@ -0,0 +1,23 @@
|
||||
import numpy as np
|
||||
from xgboost import XGBClassifier
|
||||
from sklearn.datasets import make_classification
|
||||
from sklearn.metrics import accuracy_score
|
||||
|
||||
print("🚀 Testing XGBoost with CUDA GPU...")
|
||||
try:
|
||||
X, y = make_classification(n_samples=10000, n_features=20, n_classes=2, random_state=42)
|
||||
model = XGBClassifier(
|
||||
n_estimators=100,
|
||||
max_depth=10,
|
||||
tree_method="hist",
|
||||
device="cuda",
|
||||
random_state=42,
|
||||
verbosity=1
|
||||
)
|
||||
print("Training model...")
|
||||
model.fit(X, y)
|
||||
y_pred = model.predict(X)
|
||||
acc = accuracy_score(y, y_pred)
|
||||
print(f"✅ Training successful! Accuracy: {acc*100:.2f}%")
|
||||
except Exception as e:
|
||||
print(f"❌ Error during training: {e}")
|
||||
@@ -0,0 +1,3 @@
|
||||
import torch
|
||||
checkpoint = torch.load('cloud_removal_model/cloud_removal_unet_best.pth', map_location='cpu')
|
||||
print(list(checkpoint['model_state_dict'].keys())[:5])
|
||||
@@ -0,0 +1,101 @@
|
||||
"""
|
||||
Test script for Model Manager
|
||||
Kiểm tra các chức năng: list models, load models, validate models
|
||||
"""
|
||||
|
||||
from model_manager import ModelManager, get_model_manager
|
||||
import json
|
||||
|
||||
def test_model_manager():
|
||||
print("="*70)
|
||||
print("MODEL MANAGER TEST")
|
||||
print("="*70)
|
||||
|
||||
# Initialize ModelManager
|
||||
model_manager = get_model_manager()
|
||||
print("\n✅ ModelManager initialized")
|
||||
|
||||
# Test 1: List all models
|
||||
print("\n" + "="*70)
|
||||
print("TEST 1: LIST ALL MODELS")
|
||||
print("="*70)
|
||||
|
||||
models = model_manager.list_models()
|
||||
print(f"\n📦 Found {len(models)} models:")
|
||||
|
||||
for idx, model in enumerate(models, 1):
|
||||
print(f"\n[{idx}] {model['filename']}")
|
||||
print(f" Size: {model['size_mb']:.2f} MB")
|
||||
print(f" Modified: {model['modified']}")
|
||||
|
||||
if model.get('has_metadata'):
|
||||
print(f" Type: {model.get('model_type', 'N/A')}")
|
||||
print(f" Features: {model.get('n_features', 'N/A')}")
|
||||
print(f" Accuracy: {model.get('test_accuracy', 'N/A')}")
|
||||
print(f" Feature list: {model.get('features', [])}")
|
||||
else:
|
||||
print(f" ⚠️ No metadata")
|
||||
|
||||
# Test 2: Load a model
|
||||
if len(models) > 0:
|
||||
print("\n" + "="*70)
|
||||
print("TEST 2: LOAD MODEL")
|
||||
print("="*70)
|
||||
|
||||
test_model = models[0]['filename']
|
||||
print(f"\n🔄 Loading model: {test_model}")
|
||||
|
||||
try:
|
||||
model, encoder, metadata = model_manager.load_model(test_model)
|
||||
print(f"✅ Model loaded successfully!")
|
||||
print(f"\n📊 Metadata:")
|
||||
print(json.dumps(metadata, indent=2))
|
||||
|
||||
# Test 3: Validate model
|
||||
print("\n" + "="*70)
|
||||
print("TEST 3: VALIDATE MODEL")
|
||||
print("="*70)
|
||||
|
||||
validation = model_manager.validate_model(test_model)
|
||||
print(f"\n✅ Validation result:")
|
||||
print(f" Valid: {validation['valid']}")
|
||||
if validation['errors']:
|
||||
print(f" Errors: {validation['errors']}")
|
||||
if validation['warnings']:
|
||||
print(f" Warnings: {validation['warnings']}")
|
||||
|
||||
# Test 4: Get required features
|
||||
print("\n" + "="*70)
|
||||
print("TEST 4: GET REQUIRED FEATURES")
|
||||
print("="*70)
|
||||
|
||||
features = model_manager.get_required_features(test_model)
|
||||
print(f"\n📋 Required features for {test_model}:")
|
||||
for feat in features:
|
||||
print(f" - {feat}")
|
||||
|
||||
except Exception as e:
|
||||
print(f"❌ Error loading model: {e}")
|
||||
import traceback
|
||||
traceback.print_exc()
|
||||
|
||||
# Test 5: Get latest model
|
||||
print("\n" + "="*70)
|
||||
print("TEST 5: GET LATEST MODEL")
|
||||
print("="*70)
|
||||
|
||||
latest = model_manager.get_latest_model()
|
||||
print(f"\n📌 Latest model: {latest}")
|
||||
|
||||
latest_xgb = model_manager.get_latest_model(model_type='xgboost')
|
||||
print(f"📌 Latest XGBoost model: {latest_xgb}")
|
||||
|
||||
latest_cnn = model_manager.get_latest_model(model_type='cnn')
|
||||
print(f"📌 Latest CNN model: {latest_cnn}")
|
||||
|
||||
print("\n" + "="*70)
|
||||
print("✅ ALL TESTS COMPLETED")
|
||||
print("="*70)
|
||||
|
||||
if __name__ == "__main__":
|
||||
test_model_manager()
|
||||
@@ -0,0 +1,13 @@
|
||||
import torch
|
||||
from pathlib import Path
|
||||
model = torch.load('cloud_removal_model/cloud_removal_unet_best.pth', map_location='cpu')
|
||||
print(type(model))
|
||||
print("hasattr inc:", hasattr(model, 'inc'))
|
||||
if hasattr(model, 'inc'):
|
||||
print("hasattr double_conv:", hasattr(model.inc, 'double_conv'))
|
||||
if hasattr(model.inc, 'double_conv'):
|
||||
print("in_channels:", model.inc.double_conv[0].in_channels)
|
||||
else:
|
||||
for name, param in model.named_parameters():
|
||||
print(name, param.shape)
|
||||
break
|
||||
@@ -0,0 +1,19 @@
|
||||
import geopandas as gpd
|
||||
import planetary_computer
|
||||
import pystac_client
|
||||
import odc.stac
|
||||
|
||||
bbox = [105.5, 9.2, 106.3, 10.0]
|
||||
time_range = "2023-01-01/2023-01-30"
|
||||
catalog = pystac_client.Client.open("https://planetarycomputer.microsoft.com/api/stac/v1", modifier=planetary_computer.sign_inplace)
|
||||
items = list(catalog.search(collections=["sentinel-2-l2a"], bbox=bbox, datetime=time_range).items())[:1]
|
||||
items = [planetary_computer.sign(item) for item in items]
|
||||
|
||||
x = 561609
|
||||
y = 1024183
|
||||
try:
|
||||
ds = odc.stac.load(items, bands=["B02"], crs="EPSG:32648", resolution=10, x=(x-80, x+80), y=(y-80, y+80))
|
||||
print("Success with x/y:", ds.dims)
|
||||
except Exception as e:
|
||||
print("Error with x/y:", e)
|
||||
|
||||
@@ -0,0 +1,18 @@
|
||||
import geopandas as gpd
|
||||
import planetary_computer
|
||||
import pystac_client
|
||||
import odc.stac
|
||||
import numpy as np
|
||||
|
||||
bbox = [105.5, 9.2, 106.3, 10.0]
|
||||
time_range = "2023-01-01/2023-04-30"
|
||||
catalog = pystac_client.Client.open("https://planetarycomputer.microsoft.com/api/stac/v1", modifier=planetary_computer.sign_inplace)
|
||||
# Get ALL items
|
||||
items = list(catalog.search(collections=["sentinel-2-l2a"], bbox=bbox, datetime=time_range, query={"eo:cloud_cover": {"lt": 30}}).items())
|
||||
items = [planetary_computer.sign(item) for item in items]
|
||||
print(f"Total items: {len(items)}")
|
||||
|
||||
x = 561609
|
||||
y = 1024183
|
||||
ds = odc.stac.load(items, bands=["B02"], x=(x-80, x+80), y=(y-80, y+80), crs="EPSG:32648", resolution=10, patch_url=planetary_computer.sign).compute()
|
||||
print("Time dimension size:", ds.dims['time'])
|
||||
@@ -0,0 +1,20 @@
|
||||
import geopandas as gpd
|
||||
import planetary_computer
|
||||
import pystac_client
|
||||
import odc.stac
|
||||
import numpy as np
|
||||
|
||||
bbox = [105.5, 9.2, 106.3, 10.0]
|
||||
time_range = "2023-01-01/2023-04-30"
|
||||
catalog = pystac_client.Client.open("https://planetarycomputer.microsoft.com/api/stac/v1", modifier=planetary_computer.sign_inplace)
|
||||
items = list(catalog.search(collections=["sentinel-2-l2a"], bbox=bbox, datetime=time_range, query={"eo:cloud_cover": {"lt": 30}}).items())
|
||||
items = [planetary_computer.sign(item) for item in items]
|
||||
|
||||
x = 561609
|
||||
y = 1024183
|
||||
ds = odc.stac.load(items, bands=["B02"], x=(x-80, x+80), y=(y-80, y+80), crs="EPSG:32648", resolution=10, patch_url=planetary_computer.sign, fail_on_error=False).compute()
|
||||
print("Original time size:", len(ds.time))
|
||||
ds2 = ds.dropna(dim="time", how="all")
|
||||
print("After dropna time size:", len(ds2.time))
|
||||
print("B02 mean:", np.nanmean(ds2["B02"].values))
|
||||
print("B02 non-nan count:", np.sum(~np.isnan(ds2["B02"].values)))
|
||||
@@ -0,0 +1,25 @@
|
||||
import geopandas as gpd
|
||||
import planetary_computer
|
||||
import pystac_client
|
||||
import odc.stac
|
||||
import numpy as np
|
||||
|
||||
bbox = [105.5, 9.2, 106.3, 10.0]
|
||||
time_range = "2023-01-01/2023-04-30"
|
||||
catalog = pystac_client.Client.open("https://planetarycomputer.microsoft.com/api/stac/v1", modifier=planetary_computer.sign_inplace)
|
||||
items = list(catalog.search(collections=["sentinel-2-l2a"], bbox=bbox, datetime=time_range, query={"eo:cloud_cover": {"lt": 30}}).items())
|
||||
items = [planetary_computer.sign(item) for item in items]
|
||||
|
||||
x = 561609
|
||||
y = 1024183
|
||||
ds = odc.stac.load(items, bands=["B02", "B03", "B04", "B08", "SCL"], x=(x-80, x+80), y=(y-80, y+80), crs="EPSG:32648", resolution=10, patch_url=planetary_computer.sign, fail_on_error=False).compute()
|
||||
|
||||
print("Original shape:", ds["B02"].shape)
|
||||
ds2 = ds.dropna(dim="time", how="all")
|
||||
print("After dropna time size:", len(ds2.time))
|
||||
if len(ds2.time) > 0:
|
||||
ds2 = ds2.isel(time=slice(0, 4))
|
||||
median = ds2["B02"].median(dim="time", skipna=True).values
|
||||
print("Median shape:", median.shape)
|
||||
print("Zeros in median:", np.sum(median == 0) / median.size)
|
||||
print("NaNs in median:", np.sum(np.isnan(median)) / median.size)
|
||||
@@ -0,0 +1,15 @@
|
||||
import sys
|
||||
# Thêm đường dẫn hiện tại vào PYTHONPATH để import được new_import_ODC nếu cần
|
||||
sys.path.append('.')
|
||||
import warnings
|
||||
warnings.filterwarnings('ignore')
|
||||
from new_import_ODC import load_sen1
|
||||
|
||||
print("Testing load_sen1 with a short time range to speed up Dask compute...")
|
||||
bbox = [105.5, 9.2, 106.4, 10.0]
|
||||
time_range = "2023-01-01/2023-01-31" # Short time range for fast testing
|
||||
vh, vv = load_sen1(bbox, time_range)
|
||||
print("VH shape:", vh.shape)
|
||||
print("VV shape:", vv.shape)
|
||||
print("VH CRS:", vh.rio.crs)
|
||||
print("Success!")
|
||||
@@ -0,0 +1,49 @@
|
||||
import warnings
|
||||
warnings.filterwarnings('ignore')
|
||||
|
||||
def load_sen1(bbox, time_range):
|
||||
import pystac_client
|
||||
import planetary_computer
|
||||
import odc.stac
|
||||
|
||||
catalog = pystac_client.Client.open(
|
||||
"https://planetarycomputer.microsoft.com/api/stac/v1",
|
||||
modifier=planetary_computer.sign_inplace,
|
||||
)
|
||||
|
||||
search = catalog.search(
|
||||
collections=["sentinel-1-rtc"],
|
||||
bbox=bbox,
|
||||
datetime=time_range,
|
||||
)
|
||||
items = list(search.items())
|
||||
print("Found items:", len(items))
|
||||
|
||||
ds_s1 = odc.stac.load(
|
||||
items,
|
||||
bands=["vv", "vh"],
|
||||
bbox=bbox,
|
||||
crs="EPSG:32648",
|
||||
resolution=10,
|
||||
chunks={"x": 2048, "y": 2048, "time": 1}
|
||||
)
|
||||
|
||||
ds_median = ds_s1.median(dim="time").compute()
|
||||
vv = ds_median["vv"]
|
||||
vh = ds_median["vh"]
|
||||
|
||||
vv = vv.expand_dims(dim="band")
|
||||
vh = vh.expand_dims(dim="band")
|
||||
|
||||
vv = vv.rio.write_crs("EPSG:32648")
|
||||
vh = vh.rio.write_crs("EPSG:32648")
|
||||
|
||||
return vh, vv
|
||||
|
||||
print("Testing load_sen1...")
|
||||
bbox = [105.5, 9.2, 106.4, 10.0]
|
||||
time_range = "2022-09-01/2023-10-01"
|
||||
vh, vv = load_sen1(bbox, time_range)
|
||||
print("VH shape:", vh.shape)
|
||||
print("VV shape:", vv.shape)
|
||||
print("Success!")
|
||||
@@ -0,0 +1,88 @@
|
||||
"""
|
||||
Test Microsoft Planetary Computer connectivity và token
|
||||
"""
|
||||
import planetary_computer
|
||||
from pystac_client import Client
|
||||
from datetime import datetime, timedelta
|
||||
|
||||
print("=" * 70)
|
||||
print("🧪 TESTING MICROSOFT PLANETARY COMPUTER CONNECTION")
|
||||
print("=" * 70)
|
||||
|
||||
# Test 1: Basic connection
|
||||
print("\n1️⃣ Testing basic connection...")
|
||||
try:
|
||||
catalog = Client.open(
|
||||
"https://planetarycomputer.microsoft.com/api/stac/v1",
|
||||
modifier=planetary_computer.sign_inplace,
|
||||
)
|
||||
print("✅ Successfully connected to Planetary Computer")
|
||||
print(f" Catalog ID: {catalog.id}")
|
||||
print(f" Title: {catalog.title}")
|
||||
except Exception as e:
|
||||
print(f"❌ Connection failed: {e}")
|
||||
exit(1)
|
||||
|
||||
# Test 2: List collections
|
||||
print("\n2️⃣ Testing collections access...")
|
||||
try:
|
||||
collections = list(catalog.get_collections())
|
||||
print(f"✅ Found {len(collections)} collections")
|
||||
sentinel_2 = [c for c in collections if 'sentinel-2' in c.id.lower()]
|
||||
print(f" Sentinel-2 collections: {[c.id for c in sentinel_2]}")
|
||||
except Exception as e:
|
||||
print(f"❌ Collections access failed: {e}")
|
||||
|
||||
# Test 3: Small search query (very conservative)
|
||||
print("\n3️⃣ Testing small search query...")
|
||||
try:
|
||||
# Tiny bbox in Vietnam
|
||||
bbox = [105.8, 10.0, 105.9, 10.1] # ~10km x 10km area
|
||||
end_date = datetime.now()
|
||||
start_date = end_date - timedelta(days=7) # Last 7 days only
|
||||
|
||||
time_range = f"{start_date.strftime('%Y-%m-%d')}/{end_date.strftime('%Y-%m-%d')}"
|
||||
|
||||
print(f" Bbox: {bbox}")
|
||||
print(f" Time: {time_range}")
|
||||
print(f" Searching...")
|
||||
|
||||
search = catalog.search(
|
||||
collections=["sentinel-2-l2a"],
|
||||
bbox=bbox,
|
||||
datetime=time_range,
|
||||
limit=5 # Only 5 items
|
||||
)
|
||||
|
||||
items = []
|
||||
for i, item in enumerate(search.items()):
|
||||
items.append(item)
|
||||
if i >= 4: # Stop at 5
|
||||
break
|
||||
|
||||
print(f"✅ Search successful! Found {len(items)} items")
|
||||
if items:
|
||||
first_item = items[0]
|
||||
print(f" First item: {first_item.id}")
|
||||
print(f" Date: {first_item.datetime}")
|
||||
|
||||
# Test token signing
|
||||
signed_item = planetary_computer.sign(first_item)
|
||||
print(f"✅ SAS token signing works")
|
||||
print(f" Asset keys: {list(signed_item.assets.keys())[:5]}")
|
||||
|
||||
except Exception as e:
|
||||
print(f"❌ Search failed: {e}")
|
||||
import traceback
|
||||
traceback.print_exc()
|
||||
|
||||
print("\n" + "=" * 70)
|
||||
print("🏁 Test completed!")
|
||||
print("=" * 70)
|
||||
print("\n💡 Nếu test này PASS:")
|
||||
print(" → Planetary Computer hoạt động bình thường")
|
||||
print(" → Vấn đề là query quá lớn (bbox/time range/max_scenes)")
|
||||
print("\n💡 Nếu test này FAIL:")
|
||||
print(" → Kiểm tra internet connection")
|
||||
print(" → Thử lại sau (server có thể bị quá tải)")
|
||||
print(" → Xem xét dùng dữ liệu local")
|
||||
@@ -0,0 +1,17 @@
|
||||
import geopandas as gpd
|
||||
import planetary_computer
|
||||
import pystac_client
|
||||
import odc.stac
|
||||
import numpy as np
|
||||
|
||||
bbox = [105.5, 9.2, 106.3, 10.0]
|
||||
time_range = "2023-01-01/2023-04-30"
|
||||
catalog = pystac_client.Client.open("https://planetarycomputer.microsoft.com/api/stac/v1", modifier=planetary_computer.sign_inplace)
|
||||
items = list(catalog.search(collections=["sentinel-2-l2a"], bbox=bbox, datetime=time_range, query={"eo:cloud_cover": {"lt": 30}}).items())[:4]
|
||||
items = [planetary_computer.sign(item) for item in items]
|
||||
|
||||
x = 561609
|
||||
y = 1024183
|
||||
ds = odc.stac.load(items, bands=["B02", "B03", "B04", "B08"], x=(x-80, x+80), y=(y-80, y+80), crs="EPSG:32648", resolution=10, patch_url=planetary_computer.sign).compute()
|
||||
print("B04 nanmean:", np.nanmean(ds["B04"].values))
|
||||
print("B04 nanmax:", np.nanmax(ds["B04"].values))
|
||||
@@ -0,0 +1,41 @@
|
||||
import new_import_ODC
|
||||
importlib = __import__('importlib')
|
||||
importlib.reload(new_import_ODC)
|
||||
from new_import_ODC import *
|
||||
import numpy as np
|
||||
|
||||
date_range = ("2022-09-01", "2022-10-01")
|
||||
longtitude_range = (105.86, 105.94)
|
||||
latitude_range = (9.65, 9.69)
|
||||
coordinates = (longtitude_range, latitude_range)
|
||||
|
||||
print("Loading S2...")
|
||||
data = load_data(None, date_range, longtitude_range, latitude_range)
|
||||
result = mask_clean(data)
|
||||
ds1 = calculate_indices(result, index="NDVI", satellite_mission="s2")
|
||||
ndvi = ds1["NDVI"]
|
||||
time_split = [
|
||||
slice("2022-09-01", "2023-01-01"),
|
||||
slice("2023-01-01", "2023-05-01"),
|
||||
slice("2023-05-01", "2023-07-01"),
|
||||
slice("2023-07-01", "2022-10-01"),
|
||||
]
|
||||
fill_nan_ndvi = fill_nan(ndvi, time_split)
|
||||
average_ndvi = fill_nan_ndvi.resample(time="1M").mean().compute()
|
||||
|
||||
print("Loading S1...")
|
||||
dsvh, dsvv = load_data_sen1(None, date_range, coordinates)
|
||||
average_vv = calculate_average(dsvv, time_pattern='1M')
|
||||
average_vh = calculate_average(dsvh, time_pattern='1M')
|
||||
|
||||
train = load_train_data("train/ST_training_data_updated_1130points_new.shp")
|
||||
point = train.iloc[0]
|
||||
|
||||
ndvi_val = average_ndvi.sel(x=point.geometry.x, y=point.geometry.y, method='nearest').values
|
||||
vh_val = average_vh.sel(x=point.geometry.x, y=point.geometry.y, method='nearest').values
|
||||
vv_val = average_vv.sel(x=point.geometry.x, y=point.geometry.y, method='nearest').values
|
||||
|
||||
print("NDVI shape:", ndvi_val.shape, "ndim:", ndvi_val.ndim)
|
||||
print("VH shape:", vh_val.shape, "ndim:", vh_val.ndim)
|
||||
print("VV shape:", vv_val.shape, "ndim:", vv_val.ndim)
|
||||
|
||||
@@ -0,0 +1,42 @@
|
||||
import geopandas as gpd
|
||||
import planetary_computer
|
||||
import pystac_client
|
||||
import odc.stac
|
||||
import numpy as np
|
||||
import time
|
||||
from shapely.geometry import Point, box, shape
|
||||
|
||||
bbox = [105.5, 9.2, 106.3, 10.0]
|
||||
time_range = "2023-01-01/2023-04-30"
|
||||
catalog = pystac_client.Client.open("https://planetarycomputer.microsoft.com/api/stac/v1", modifier=planetary_computer.sign_inplace)
|
||||
items = list(catalog.search(collections=["sentinel-2-l2a"], bbox=bbox, datetime=time_range, query={"eo:cloud_cover": {"lt": 30}}).items())
|
||||
|
||||
x = 561609
|
||||
y = 1024183
|
||||
|
||||
start = time.time()
|
||||
# Filter items by spatial intersection
|
||||
from pyproj import Transformer
|
||||
# The items geometry are in EPSG:4326 (lon, lat)
|
||||
# Our x, y are in EPSG:32648
|
||||
transformer = Transformer.from_crs("epsg:32648", "epsg:4326", always_xy=True)
|
||||
lon, lat = transformer.transform(x, y)
|
||||
point = Point(lon, lat)
|
||||
|
||||
filtered_items = []
|
||||
for item in items:
|
||||
geom = shape(item.geometry)
|
||||
if geom.contains(point):
|
||||
filtered_items.append(item)
|
||||
|
||||
filtered_items = sorted(filtered_items, key=lambda x: x.properties["eo:cloud_cover"])
|
||||
|
||||
print("Original items:", len(items))
|
||||
print("Filtered items:", len(filtered_items))
|
||||
print("Time to filter:", time.time() - start)
|
||||
|
||||
start = time.time()
|
||||
filtered_items = [planetary_computer.sign(item) for item in filtered_items]
|
||||
ds = odc.stac.load(filtered_items[:4], bands=["B02"], x=(x-80, x+80), y=(y-80, y+80), crs="EPSG:32648", resolution=10, patch_url=planetary_computer.sign, fail_on_error=False).compute()
|
||||
print("Time to load 4 items:", time.time() - start)
|
||||
print(ds["B02"].shape)
|
||||
@@ -0,0 +1,113 @@
|
||||
#!/usr/bin/env python3
|
||||
"""
|
||||
Test script to verify training API endpoints
|
||||
"""
|
||||
|
||||
import requests
|
||||
import json
|
||||
|
||||
API_BASE = "http://localhost:8000/api"
|
||||
|
||||
def test_training_labels():
|
||||
"""Test /api/training/labels endpoint"""
|
||||
print("=" * 70)
|
||||
print("TEST 1: Getting training labels")
|
||||
print("=" * 70)
|
||||
|
||||
response = requests.get(f"{API_BASE}/training/labels")
|
||||
if response.ok:
|
||||
data = response.json()
|
||||
print(f"✅ Success! Found {data['count']} labels:")
|
||||
for label in data['labels']:
|
||||
print(f" {label['code']}: {label['name']}")
|
||||
else:
|
||||
print(f"❌ Error: {response.status_code}")
|
||||
print()
|
||||
|
||||
def test_training_files():
|
||||
"""Test /api/training/files endpoint"""
|
||||
print("=" * 70)
|
||||
print("TEST 2: Getting training files")
|
||||
print("=" * 70)
|
||||
|
||||
response = requests.get(f"{API_BASE}/training/files")
|
||||
if response.ok:
|
||||
data = response.json()
|
||||
print(f"✅ Success! Found {data['count']} training files:")
|
||||
for file in data['files']:
|
||||
print(f"\n 📄 {file['filename']}")
|
||||
print(f" Size: {file['size_mb']} MB")
|
||||
if 'point_count' in file:
|
||||
print(f" Points: {file['point_count']}")
|
||||
print(f" Label column: {file.get('label_column', 'N/A')}")
|
||||
print(f" Unique labels: {file.get('label_count', 0)}")
|
||||
else:
|
||||
print(f"❌ Error: {response.status_code}")
|
||||
print()
|
||||
|
||||
def test_shapefile_labels(filename="ST_training data_updated_1130points_new.shp"):
|
||||
"""Test /api/training/shapefile/{filename}/labels endpoint"""
|
||||
print("=" * 70)
|
||||
print(f"TEST 3: Getting labels from shapefile: {filename}")
|
||||
print("=" * 70)
|
||||
|
||||
response = requests.get(f"{API_BASE}/training/shapefile/{filename}/labels")
|
||||
if response.ok:
|
||||
data = response.json()
|
||||
print(f"✅ Success!")
|
||||
print(f" Filename: {data['filename']}")
|
||||
print(f" Points: {data['point_count']}")
|
||||
print(f" Label column: {data['label_column']}")
|
||||
print(f" Unique labels: {data['label_count']}")
|
||||
print(f" Bbox: {data['bbox']}")
|
||||
print(f"\n Labels distribution:")
|
||||
for label in data['labels']:
|
||||
mapped = "✅" if label['mapped'] else "⚠️"
|
||||
print(f" {mapped} {label['name']}: {label['count']} points (code: {label['code']})")
|
||||
else:
|
||||
print(f"❌ Error: {response.status_code}")
|
||||
print(response.text)
|
||||
print()
|
||||
|
||||
def test_config_presets():
|
||||
"""Test /api/config/presets endpoint"""
|
||||
print("=" * 70)
|
||||
print("TEST 4: Getting config presets")
|
||||
print("=" * 70)
|
||||
|
||||
response = requests.get(f"{API_BASE}/config/presets")
|
||||
if response.ok:
|
||||
data = response.json()
|
||||
print(f"✅ Success! Found {len(data['presets'])} presets:")
|
||||
for preset in data['presets']:
|
||||
print(f"\n 📋 {preset['name']}")
|
||||
config = preset['config']
|
||||
print(f" Bbox: [{config['min_lon']}, {config['min_lat']}, {config['max_lon']}, {config['max_lat']}]")
|
||||
print(f" Time: {config['start_date']} → {config['end_date']}")
|
||||
print(f" Resolution: {config['resolution']}m")
|
||||
else:
|
||||
print(f"❌ Error: {response.status_code}")
|
||||
print()
|
||||
|
||||
if __name__ == "__main__":
|
||||
print("\n" + "=" * 70)
|
||||
print("🧪 TESTING TRAINING API ENDPOINTS")
|
||||
print("=" * 70 + "\n")
|
||||
|
||||
try:
|
||||
test_training_labels()
|
||||
test_training_files()
|
||||
test_shapefile_labels()
|
||||
test_config_presets()
|
||||
|
||||
print("=" * 70)
|
||||
print("✅ ALL TESTS COMPLETED!")
|
||||
print("=" * 70)
|
||||
|
||||
except requests.exceptions.ConnectionError:
|
||||
print("\n❌ Error: Cannot connect to API server")
|
||||
print("Make sure the server is running: python api_server.py")
|
||||
except Exception as e:
|
||||
print(f"\n❌ Error: {e}")
|
||||
import traceback
|
||||
traceback.print_exc()
|
||||
@@ -0,0 +1,5 @@
|
||||
from train_cloud_removal import UNet
|
||||
model = UNet(in_channels=6, out_channels=4)
|
||||
print(hasattr(model, 'inc'))
|
||||
print(hasattr(model, 'conv1'))
|
||||
print(list(model.parameters())[0].shape)
|
||||
@@ -0,0 +1,13 @@
|
||||
import numpy as np
|
||||
|
||||
y = []
|
||||
# simulate appending 1130 labels
|
||||
for i in range(1130):
|
||||
y.append(i % 5)
|
||||
|
||||
y = np.array(y)
|
||||
unique_labels = sorted(list(np.unique(y)))
|
||||
label_map = {lbl: i for i, lbl in enumerate(unique_labels)}
|
||||
y_mapped = np.array([label_map[l] for l in y])
|
||||
|
||||
print(len(y), len(y_mapped))
|
||||
@@ -1,947 +0,0 @@
|
||||
{
|
||||
"cells": [
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 1,
|
||||
"id": "912ed572-1658-406b-976c-cd6de2d4e89e",
|
||||
"metadata": {
|
||||
"tags": []
|
||||
},
|
||||
"outputs": [
|
||||
{
|
||||
"ename": "ModuleNotFoundError",
|
||||
"evalue": "No module named 'easi_tools'",
|
||||
"output_type": "error",
|
||||
"traceback": [
|
||||
"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
|
||||
"\u001b[0;31mModuleNotFoundError\u001b[0m Traceback (most recent call last)",
|
||||
"File \u001b[0;32m<timed exec>:4\u001b[0m\n",
|
||||
"File \u001b[0;32m~/CSIROBoeingPhase5-Vietnam/new_import_ODC.py:23\u001b[0m\n\u001b[1;32m 21\u001b[0m easinotebooksrepo \u001b[38;5;241m=\u001b[39m \u001b[38;5;124m'\u001b[39m\u001b[38;5;124m/home/jovyan/easi-notebooks\u001b[39m\u001b[38;5;124m'\u001b[39m\n\u001b[1;32m 22\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m easinotebooksrepo \u001b[38;5;129;01mnot\u001b[39;00m \u001b[38;5;129;01min\u001b[39;00m sys\u001b[38;5;241m.\u001b[39mpath: sys\u001b[38;5;241m.\u001b[39mpath\u001b[38;5;241m.\u001b[39mappend(easinotebooksrepo)\n\u001b[0;32m---> 23\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m\u001b[38;5;250m \u001b[39m\u001b[38;5;21;01measi_tools\u001b[39;00m\u001b[38;5;250m \u001b[39m\u001b[38;5;28;01mimport\u001b[39;00m EasiDefaults, xarray_object_size, notebook_utils, unset_cachingproxy\n\u001b[1;32m 24\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m\u001b[38;5;250m \u001b[39m\u001b[38;5;21;01measi_tools\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mload_s2l2a\u001b[39;00m\u001b[38;5;250m \u001b[39m\u001b[38;5;28;01mimport\u001b[39;00m load_s2l2a_with_offset\n\u001b[1;32m 25\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m\u001b[38;5;250m \u001b[39m\u001b[38;5;21;01mdask\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mdistributed\u001b[39;00m\u001b[38;5;250m \u001b[39m\u001b[38;5;28;01mimport\u001b[39;00m progress\n",
|
||||
"\u001b[0;31mModuleNotFoundError\u001b[0m: No module named 'easi_tools'"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"%%time\n",
|
||||
"%matplotlib inline\n",
|
||||
"\n",
|
||||
"import importlib\n",
|
||||
"import new_import_ODC \n",
|
||||
"\n",
|
||||
"importlib.reload(new_import_ODC)\n",
|
||||
"\n",
|
||||
"from new_import_ODC import *\n",
|
||||
"\n",
|
||||
"print(\"✅ All modules loaded successfully\")"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 2,
|
||||
"id": "d824dc4f-994b-4d1c-8d24-ce6674da141c",
|
||||
"metadata": {
|
||||
"tags": []
|
||||
},
|
||||
"outputs": [
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"✅ AWS credentials loaded from environment variables\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stderr",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"/home/x79/miniconda/envs/env_01/lib/python3.10/site-packages/distributed/node.py:187: UserWarning: Port 8787 is already in use.\n",
|
||||
"Perhaps you already have a cluster running?\n",
|
||||
"Hosting the HTTP server on port 41709 instead\n",
|
||||
" warnings.warn(\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"✅ Dask cluster initialized\n",
|
||||
" Cluster: LocalCluster(9f2167a3, 'tcp://127.0.0.1:41233', workers=4, threads=24, memory=31.26 GiB)\n",
|
||||
"✅ Datacube connected (metadata only)\n",
|
||||
"\n",
|
||||
"======================================================================\n",
|
||||
"CPU times: user 4.98 s, sys: 831 ms, total: 5.81 s\n",
|
||||
"Wall time: 7.69 s\n"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"%%time\n",
|
||||
"import os\n",
|
||||
"import sys\n",
|
||||
"\n",
|
||||
"print(\"✅ AWS credentials loaded from environment variables\")\n",
|
||||
"\n",
|
||||
"# Cấu hình Dask local\n",
|
||||
"from dask.distributed import Client, LocalCluster\n",
|
||||
"\n",
|
||||
"cluster = LocalCluster(n_workers=4)\n",
|
||||
"client = Client(cluster)\n",
|
||||
"print(\"✅ Dask cluster initialized\")\n",
|
||||
"print(f\" Cluster: {cluster}\")\n",
|
||||
"\n",
|
||||
"# Khai báo Datacube (chỉ để lấy metadata, không dùng load())\n",
|
||||
"import datacube\n",
|
||||
"try:\n",
|
||||
" dc = datacube.Datacube()\n",
|
||||
" print(\"✅ Datacube connected (metadata only)\")\n",
|
||||
"except Exception as e:\n",
|
||||
" print(f\"⚠️ Datacube connection not critical: {e}\")\n",
|
||||
" dc = None\n",
|
||||
"\n",
|
||||
"print(\"\\n\" + \"=\"*70)"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 3,
|
||||
"id": "1e113730",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"======================================================================\n",
|
||||
"GETTING SENTINEL-2 SCENE METADATA\n",
|
||||
"======================================================================\n",
|
||||
"\n",
|
||||
"[1] Loading metadata from datacube...\n",
|
||||
" ✅ Found 40 scenes\n",
|
||||
"\n",
|
||||
"[2] Selected scene: S2A_48PWR_20231226_0_L2A\n",
|
||||
" Date: 2023-12-26 03:35:26.919000+00:00\n",
|
||||
"\n",
|
||||
"[3] Available bands:\n",
|
||||
" - nir: https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/48/P/WR/20\n",
|
||||
" - red: https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/48/P/WR/20\n",
|
||||
" - scl: https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/48/P/WR/20\n",
|
||||
" - blue: https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/48/P/WR/20\n",
|
||||
" - green: https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/48/P/WR/20\n",
|
||||
" - nir08: https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/48/P/WR/20\n",
|
||||
" - nir09: https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/48/P/WR/20\n",
|
||||
" - swir16: https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/48/P/WR/20\n",
|
||||
" - swir22: https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/48/P/WR/20\n",
|
||||
" - coastal: https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/48/P/WR/20\n",
|
||||
" - rededge1: https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/48/P/WR/20\n",
|
||||
" - rededge2: https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/48/P/WR/20\n",
|
||||
" - rededge3: https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/48/P/WR/20\n",
|
||||
"======================================================================\n",
|
||||
"CPU times: user 3.34 s, sys: 76.3 ms, total: 3.41 s\n",
|
||||
"Wall time: 3.23 s\n"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"%%time\n",
|
||||
"# 🔧 Get Sentinel-2 scene metadata from datacube\n",
|
||||
"print(\"=\"*70)\n",
|
||||
"print(\"GETTING SENTINEL-2 SCENE METADATA\")\n",
|
||||
"print(\"=\"*70)\n",
|
||||
"\n",
|
||||
"date_range = (\"2023-03-01\", \"2023-12-31\")\n",
|
||||
"longtitude_range = (105.5, 106.4)\n",
|
||||
"latitude_range = (9.2, 10.0)\n",
|
||||
"\n",
|
||||
"try:\n",
|
||||
" print(f\"\\n[1] Loading metadata from datacube...\")\n",
|
||||
" datasets = list(dc.find_datasets(product='s2_l2a', time=date_range))\n",
|
||||
" print(f\" ✅ Found {len(datasets)} scenes\")\n",
|
||||
" \n",
|
||||
" if datasets:\n",
|
||||
" selected = datasets[0]\n",
|
||||
" print(f\"\\n[2] Selected scene: {selected.metadata.label}\")\n",
|
||||
" scene_datetime = selected.time.begin if hasattr(selected.time, 'begin') else selected.time\n",
|
||||
" print(f\" Date: {scene_datetime}\")\n",
|
||||
" \n",
|
||||
" # Display measurement paths\n",
|
||||
" print(f\"\\n[3] Available bands:\")\n",
|
||||
" for name, measurement in selected.measurements.items():\n",
|
||||
" print(f\" - {name}: {measurement['path'][:80]}\")\n",
|
||||
" \n",
|
||||
"except Exception as e:\n",
|
||||
" print(f\"❌ Error: {e}\")\n",
|
||||
" import traceback\n",
|
||||
" traceback.print_exc()\n",
|
||||
"\n",
|
||||
"print(\"=\"*70)"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 4,
|
||||
"id": "3cd69645",
|
||||
"metadata": {},
|
||||
"outputs": [
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"======================================================================\n",
|
||||
"CHECKING FOR CACHED DATASET\n",
|
||||
"======================================================================\n",
|
||||
"\n",
|
||||
"⏳ Cache file not found: dataset_cache/sentinel2_timeseries_40scenes.nc\n",
|
||||
" Will download from S3 and save cache\n",
|
||||
" (Next run will use cache automatically)\n",
|
||||
"======================================================================\n",
|
||||
"CPU times: user 4.36 ms, sys: 3.7 ms, total: 8.06 ms\n",
|
||||
"Wall time: 7.22 ms\n"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"%%time\n",
|
||||
"# 🔍 CHECK IF DATASET CACHE EXISTS (Skip download if available)\n",
|
||||
"print(\"=\"*70)\n",
|
||||
"print(\"CHECKING FOR CACHED DATASET\")\n",
|
||||
"print(\"=\"*70)\n",
|
||||
"\n",
|
||||
"import os\n",
|
||||
"import xarray as xr\n",
|
||||
"\n",
|
||||
"cache_dir = \"dataset_cache\"\n",
|
||||
"cache_file = f\"{cache_dir}/sentinel2_timeseries_40scenes.nc\"\n",
|
||||
"\n",
|
||||
"use_cache = False\n",
|
||||
"\n",
|
||||
"if os.path.exists(cache_file):\n",
|
||||
" print(f\"\\n✅ Cache file found: {cache_file}\")\n",
|
||||
" \n",
|
||||
" # Get file info\n",
|
||||
" file_size_gb = os.path.getsize(cache_file) / (1024**3)\n",
|
||||
" print(f\" File size: {file_size_gb:.2f} GB\")\n",
|
||||
" \n",
|
||||
" # Try to load\n",
|
||||
" try:\n",
|
||||
" print(f\"\\n🔄 Loading dataset from cache...\")\n",
|
||||
" data = xr.open_dataset(cache_file)\n",
|
||||
" \n",
|
||||
" print(f\"✅ Dataset loaded from cache!\")\n",
|
||||
" print(f\" Total scenes: {len(data['time'])}\")\n",
|
||||
" print(f\" Variables: {len(data.data_vars)}\")\n",
|
||||
" print(f\" Dimensions: {dict(data.dims)}\")\n",
|
||||
" print(f\"\\n ⏭️ Skipping S3 download (using cached data)\")\n",
|
||||
" \n",
|
||||
" use_cache = True\n",
|
||||
" \n",
|
||||
" except Exception as e:\n",
|
||||
" print(f\"❌ Error loading cache: {e}\")\n",
|
||||
" print(f\" Will download fresh data from S3\")\n",
|
||||
" use_cache = False\n",
|
||||
"else:\n",
|
||||
" print(f\"\\n⏳ Cache file not found: {cache_file}\")\n",
|
||||
" print(f\" Will download from S3 and save cache\")\n",
|
||||
" print(f\" (Next run will use cache automatically)\")\n",
|
||||
"\n",
|
||||
"print(\"=\"*70)"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 5,
|
||||
"id": "435f9f78-a9a4-4226-86ca-d4bec42d454e",
|
||||
"metadata": {
|
||||
"tags": []
|
||||
},
|
||||
"outputs": [
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"======================================================================\n",
|
||||
"LOADING SENTINEL-2 DATA FROM S3 COGs (RASTERIO) - OPTIMAL ACCURACY\n",
|
||||
"======================================================================\n",
|
||||
"\n",
|
||||
"📥 Downloading from S3...\n",
|
||||
"\n",
|
||||
"📦 Found 40 available scenes\n",
|
||||
" Date range: 2023-03-01 to 2023-12-31\n",
|
||||
"\n",
|
||||
"[LOADING] Loading ALL 40 scenes with ALL available bands...\n",
|
||||
" (Keeping NATIVE resolution - NO upsampling/magnification)\n",
|
||||
" Available bands: ['nir', 'red', 'scl', 'blue', 'green', 'nir08', 'nir09', 'swir16', 'swir22', 'coastal', 'rededge1', 'rededge2', 'rededge3']\n",
|
||||
"\n",
|
||||
" [ 1/1] S2A_48PWR_20231226_0_L2A (2023-12-26)\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
" ✅ 13 bands loaded\n",
|
||||
"\n",
|
||||
"✅ Successfully loaded 1 scenes!\n",
|
||||
"\n",
|
||||
"[RESOLUTION NORMALIZATION] Aligning all bands to native resolution (NO magnification)...\n",
|
||||
" Reference resolution: 10980×10980 pixels (native nir)\n",
|
||||
" Resampling scl: 5490×5490 → 10980×10980\n",
|
||||
" Resampling nir08: 5490×5490 → 10980×10980\n",
|
||||
" Resampling nir09: 1830×1830 → 10980×10980\n",
|
||||
" Resampling swir16: 5490×5490 → 10980×10980\n",
|
||||
" Resampling swir22: 5490×5490 → 10980×10980\n",
|
||||
" Resampling coastal: 1830×1830 → 10980×10980\n",
|
||||
" Resampling rededge1: 5490×5490 → 10980×10980\n",
|
||||
" Resampling rededge2: 5490×5490 → 10980×10980\n",
|
||||
" Resampling rededge3: 5490×5490 → 10980×10980\n",
|
||||
"✅ Resolution normalization complete! (9 bands resampled)\n",
|
||||
"\n",
|
||||
"[SPECTRAL INDICES] Calculating spectral indices for each scene...\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stderr",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"<timed exec>:169: RuntimeWarning: divide by zero encountered in divide\n",
|
||||
"<timed exec>:169: RuntimeWarning: invalid value encountered in divide\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"✅ Calculated 2 spectral indices per scene\n",
|
||||
"\n",
|
||||
"[STACKING] Stacking all 1 scenes to create time-series...\n",
|
||||
"\n",
|
||||
"[TEMPORAL FEATURES] Computing temporal features from time-series...\n",
|
||||
"✅ Added 6 temporal/aggregate features\n",
|
||||
"\n",
|
||||
"[CACHE] Saving dataset to cache...\n",
|
||||
"✅ Dataset saved to cache: dataset_cache/sentinel2_timeseries_40scenes.nc\n",
|
||||
" Cache size: 6.40 GB\n",
|
||||
"\n",
|
||||
"✅ OPTIMAL Dataset with native resolution + temporal features created!\n",
|
||||
" ======================================================================\n",
|
||||
" 🎬 Total scenes (time steps): 1\n",
|
||||
" 📊 Total bands/variables: 21\n",
|
||||
" 🖼️ Spatial size: 10980 × 10980 pixels (NATIVE resolution)\n",
|
||||
" 📏 Native resolution: 10m (Sentinel-2 L2A)\n",
|
||||
" ⏰ Temporal range: 2023-12-26 to 2023-12-26\n",
|
||||
"❌ Error: name 'notebook_utils' is not defined\n",
|
||||
"======================================================================\n",
|
||||
"CPU times: user 9min, sys: 4min 16s, total: 13min 16s\n",
|
||||
"Wall time: 16min 42s\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stderr",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"Traceback (most recent call last):\n",
|
||||
" File \"<timed exec>\", line 262, in <module>\n",
|
||||
"NameError: name 'notebook_utils' is not defined\n"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"%%time\n",
|
||||
"# 💾 LOAD SENTINEL-2 DATA DIRECTLY FROM S3 COGS USING RASTERIO - WITH TEMPORAL FEATURES\n",
|
||||
"print(\"=\"*70)\n",
|
||||
"print(\"LOADING SENTINEL-2 DATA FROM S3 COGs (RASTERIO) - OPTIMAL ACCURACY\")\n",
|
||||
"print(\"=\"*70)\n",
|
||||
"\n",
|
||||
"try:\n",
|
||||
" import rasterio\n",
|
||||
" import xarray as xr\n",
|
||||
" import numpy as np\n",
|
||||
" from scipy import ndimage\n",
|
||||
" \n",
|
||||
" # ===== CHECK IF SHOULD SKIP DOWNLOAD =====\n",
|
||||
" if use_cache and data is not None:\n",
|
||||
" print(f\"\\n✅ Using cached dataset - skipping download!\")\n",
|
||||
" print(f\" Variables: {len(data.data_vars)}\")\n",
|
||||
" print(f\" Shape: {data.dims}\")\n",
|
||||
" display(data)\n",
|
||||
" \n",
|
||||
" else:\n",
|
||||
" # ===== DOWNLOAD FROM S3 =====\n",
|
||||
" print(f\"\\n📥 Downloading from S3...\")\n",
|
||||
" \n",
|
||||
" # Get all scenes from datacube metadata\n",
|
||||
" datasets = list(dc.find_datasets(\n",
|
||||
" product='s2_l2a',\n",
|
||||
" time=date_range\n",
|
||||
" ))\n",
|
||||
" \n",
|
||||
" if not datasets:\n",
|
||||
" raise ValueError(\"No datasets found for date range\")\n",
|
||||
" \n",
|
||||
" print(f\"\\n📦 Found {len(datasets)} available scenes\")\n",
|
||||
" print(f\" Date range: {date_range[0]} to {date_range[1]}\")\n",
|
||||
" \n",
|
||||
" # ===== LOAD ALL SCENES WITH ALL AVAILABLE BANDS (NO MAGNIFICATION) =====\n",
|
||||
" print(f\"\\n[LOADING] Loading ALL {len(datasets)} scenes with ALL available bands...\")\n",
|
||||
" print(f\" (Keeping NATIVE resolution - NO upsampling/magnification)\")\n",
|
||||
" \n",
|
||||
" # num_scenes = len(datasets) # Load ALL scenes\n",
|
||||
" num_scenes = 1 # Load ALL scenes\n",
|
||||
" all_data_dict = {}\n",
|
||||
" failed_scenes = []\n",
|
||||
" scene_dates = []\n",
|
||||
" \n",
|
||||
" # Discover all available bands from first scene\n",
|
||||
" first_scene = datasets[0]\n",
|
||||
" all_available_bands = list(first_scene.measurements.keys())\n",
|
||||
" print(f\" Available bands: {all_available_bands}\")\n",
|
||||
" \n",
|
||||
" for scene_idx in range(num_scenes):\n",
|
||||
" selected = datasets[scene_idx]\n",
|
||||
" scene_label = selected.metadata.label\n",
|
||||
" scene_datetime = selected.time.begin if hasattr(selected.time, 'begin') else selected.time\n",
|
||||
" scene_dates.append(scene_datetime)\n",
|
||||
" \n",
|
||||
" # Print progress every 5 scenes\n",
|
||||
" if scene_idx % 5 == 0 or scene_idx == 0 or scene_idx == num_scenes - 1:\n",
|
||||
" print(f\"\\n [{scene_idx + 1:2d}/{num_scenes}] {scene_label} ({scene_datetime.date()})\")\n",
|
||||
" \n",
|
||||
" # Load ALL available bands from S3 COGs\n",
|
||||
" scene_data_dict = {}\n",
|
||||
" \n",
|
||||
" for band_name in all_available_bands:\n",
|
||||
" if band_name in selected.measurements:\n",
|
||||
" band_path = selected.measurements[band_name]['path']\n",
|
||||
" \n",
|
||||
" try:\n",
|
||||
" with rasterio.open(band_path) as src:\n",
|
||||
" data_band = src.read(1)\n",
|
||||
" scene_data_dict[band_name] = data_band\n",
|
||||
" except Exception as e:\n",
|
||||
" if scene_idx % 5 == 0:\n",
|
||||
" print(f\" ⚠️ Error loading {band_name}: {str(e)[:30]}\")\n",
|
||||
" failed_scenes.append((scene_idx, scene_label, band_name, str(e)))\n",
|
||||
" \n",
|
||||
" if scene_data_dict:\n",
|
||||
" all_data_dict[scene_idx] = scene_data_dict\n",
|
||||
" if scene_idx % 5 == 0 or scene_idx == num_scenes - 1:\n",
|
||||
" print(f\" ✅ {len(scene_data_dict)} bands loaded\")\n",
|
||||
" else:\n",
|
||||
" failed_scenes.append((scene_idx, scene_label, \"all\", \"No bands loaded\"))\n",
|
||||
" \n",
|
||||
" if not all_data_dict:\n",
|
||||
" raise ValueError(\"Could not load any bands from any scene\")\n",
|
||||
" \n",
|
||||
" print(f\"\\n✅ Successfully loaded {len(all_data_dict)} scenes!\")\n",
|
||||
" if failed_scenes:\n",
|
||||
" print(f\"⚠️ Failed to load {len(failed_scenes)} band instances (will be skipped)\")\n",
|
||||
" \n",
|
||||
" # ===== NORMALIZE RESOLUTION (No upsampling - just match to highest) =====\n",
|
||||
" print(f\"\\n[RESOLUTION NORMALIZATION] Aligning all bands to native resolution (NO magnification)...\")\n",
|
||||
" \n",
|
||||
" # Find max resolution\n",
|
||||
" ref_resolution = None\n",
|
||||
" max_size = 0\n",
|
||||
" max_band = None\n",
|
||||
" \n",
|
||||
" for scene_idx in all_data_dict.keys():\n",
|
||||
" for band_name, data_band in all_data_dict[scene_idx].items():\n",
|
||||
" size = data_band.shape[0]\n",
|
||||
" if size > max_size:\n",
|
||||
" max_size = size\n",
|
||||
" ref_resolution = size\n",
|
||||
" max_band = band_name\n",
|
||||
" \n",
|
||||
" print(f\" Reference resolution: {max_size}×{max_size} pixels (native {max_band})\")\n",
|
||||
" \n",
|
||||
" # Resample all bands to match reference resolution (both up and down)\n",
|
||||
" resampled_count = 0\n",
|
||||
" for scene_idx in all_data_dict.keys():\n",
|
||||
" for band_name in list(all_data_dict[scene_idx].keys()):\n",
|
||||
" band_data_arr = all_data_dict[scene_idx][band_name]\n",
|
||||
" current_size = band_data_arr.shape[0]\n",
|
||||
" \n",
|
||||
" if current_size != ref_resolution:\n",
|
||||
" scale_factor = ref_resolution / current_size\n",
|
||||
" \n",
|
||||
" # Resample to match reference resolution (both up and down)\n",
|
||||
" if band_name == 'scl':\n",
|
||||
" resampled_data = ndimage.zoom(band_data_arr, scale_factor, order=0)\n",
|
||||
" else:\n",
|
||||
" resampled_data = ndimage.zoom(band_data_arr, scale_factor, order=1)\n",
|
||||
" \n",
|
||||
" all_data_dict[scene_idx][band_name] = resampled_data\n",
|
||||
" new_size = resampled_data.shape[0]\n",
|
||||
" if scene_idx == 0: # Print for first scene only to reduce clutter\n",
|
||||
" print(f\" Resampling {band_name}: {current_size}×{current_size} → {new_size}×{new_size}\")\n",
|
||||
" resampled_count += 1\n",
|
||||
" \n",
|
||||
" print(f\"✅ Resolution normalization complete! ({resampled_count} bands resampled)\")\n",
|
||||
" \n",
|
||||
" # ===== CALCULATE SPECTRAL INDICES FOR EACH SCENE =====\n",
|
||||
" print(f\"\\n[SPECTRAL INDICES] Calculating spectral indices for each scene...\")\n",
|
||||
" \n",
|
||||
" indices_count = 0\n",
|
||||
" for scene_idx in all_data_dict.keys():\n",
|
||||
" scene_data = all_data_dict[scene_idx]\n",
|
||||
" \n",
|
||||
" try:\n",
|
||||
" # NDVI: (NIR - Red) / (NIR + Red)\n",
|
||||
" if 'nir' in scene_data and 'red' in scene_data:\n",
|
||||
" nir = scene_data['nir'].astype(float)\n",
|
||||
" red = scene_data['red'].astype(float)\n",
|
||||
" ndvi = (nir - red) / (nir + red + 1e-8)\n",
|
||||
" scene_data['ndvi'] = ndvi.astype(np.float32)\n",
|
||||
" indices_count += 1\n",
|
||||
" \n",
|
||||
" # NDBI: (SWIR - NIR) / (SWIR + NIR)\n",
|
||||
" if 'b11' in scene_data and 'nir' in scene_data:\n",
|
||||
" swir = scene_data['b11'].astype(float)\n",
|
||||
" nir = scene_data['nir'].astype(float)\n",
|
||||
" ndbi = (swir - nir) / (swir + nir + 1e-8)\n",
|
||||
" scene_data['ndbi'] = ndbi.astype(np.float32)\n",
|
||||
" indices_count += 1\n",
|
||||
" \n",
|
||||
" # NDWI: (NIR - SWIR) / (NIR + SWIR)\n",
|
||||
" if 'nir' in scene_data and 'b11' in scene_data:\n",
|
||||
" nir = scene_data['nir'].astype(float)\n",
|
||||
" swir = scene_data['b11'].astype(float)\n",
|
||||
" ndwi = (nir - swir) / (nir + swir + 1e-8)\n",
|
||||
" scene_data['ndwi'] = ndwi.astype(np.float32)\n",
|
||||
" indices_count += 1\n",
|
||||
" \n",
|
||||
" # EVI: Enhanced Vegetation Index\n",
|
||||
" if 'nir' in scene_data and 'red' in scene_data and 'blue' in scene_data:\n",
|
||||
" nir = scene_data['nir'].astype(float)\n",
|
||||
" red = scene_data['red'].astype(float)\n",
|
||||
" blue = scene_data['blue'].astype(float)\n",
|
||||
" evi = 2.5 * (nir - red) / (nir + 6*red - 7.5*blue + 1)\n",
|
||||
" scene_data['evi'] = evi.astype(np.float32)\n",
|
||||
" indices_count += 1\n",
|
||||
" \n",
|
||||
" except Exception as e:\n",
|
||||
" pass\n",
|
||||
" \n",
|
||||
" print(f\"✅ Calculated {indices_count} spectral indices per scene\")\n",
|
||||
" \n",
|
||||
" # ===== STACK SCENES ALONG TIME DIMENSION =====\n",
|
||||
" print(f\"\\n[STACKING] Stacking all {len(all_data_dict)} scenes to create time-series...\")\n",
|
||||
" \n",
|
||||
" data_vars = {}\n",
|
||||
" band_names = list(all_data_dict[0].keys())\n",
|
||||
" \n",
|
||||
" for band_name in band_names:\n",
|
||||
" band_data_list = []\n",
|
||||
" for scene_idx in sorted(all_data_dict.keys()):\n",
|
||||
" if band_name in all_data_dict[scene_idx]:\n",
|
||||
" band_data_list.append(all_data_dict[scene_idx][band_name])\n",
|
||||
" \n",
|
||||
" if band_data_list:\n",
|
||||
" stacked = np.stack(band_data_list, axis=0)\n",
|
||||
" data_vars[band_name] = (['time', 'y', 'x'], stacked)\n",
|
||||
" \n",
|
||||
" # Create xarray Dataset with time dimension\n",
|
||||
" first_band_data = list(all_data_dict[0].values())[0]\n",
|
||||
" y_size, x_size = first_band_data.shape\n",
|
||||
" \n",
|
||||
" data = xr.Dataset(\n",
|
||||
" data_vars,\n",
|
||||
" coords={\n",
|
||||
" 'time': np.arange(len(all_data_dict)),\n",
|
||||
" 'x': np.arange(x_size),\n",
|
||||
" 'y': np.arange(y_size)\n",
|
||||
" }\n",
|
||||
" )\n",
|
||||
" \n",
|
||||
" # ===== CALCULATE TEMPORAL FEATURES FOR ACCURACY =====\n",
|
||||
" print(f\"\\n[TEMPORAL FEATURES] Computing temporal features from time-series...\")\n",
|
||||
" \n",
|
||||
" temporal_features_added = 0\n",
|
||||
" \n",
|
||||
" # For NDVI: temporal statistics\n",
|
||||
" if 'ndvi' in data.data_vars:\n",
|
||||
" ndvi_ts = data['ndvi']\n",
|
||||
" \n",
|
||||
" # Min NDVI (vegetation stress indicator)\n",
|
||||
" data['ndvi_min'] = ndvi_ts.min(dim='time')\n",
|
||||
" temporal_features_added += 1\n",
|
||||
" \n",
|
||||
" # Max NDVI (peak vegetation)\n",
|
||||
" data['ndvi_max'] = ndvi_ts.max(dim='time')\n",
|
||||
" temporal_features_added += 1\n",
|
||||
" \n",
|
||||
" # Mean NDVI\n",
|
||||
" data['ndvi_mean'] = ndvi_ts.mean(dim='time')\n",
|
||||
" temporal_features_added += 1\n",
|
||||
" \n",
|
||||
" # NDVI range (variability)\n",
|
||||
" data['ndvi_range'] = data['ndvi_max'] - data['ndvi_min']\n",
|
||||
" temporal_features_added += 1\n",
|
||||
" \n",
|
||||
" # NDVI std (temporal consistency)\n",
|
||||
" data['ndvi_std'] = ndvi_ts.std(dim='time')\n",
|
||||
" temporal_features_added += 1\n",
|
||||
" \n",
|
||||
" # For all indices: mean values (aggregate features)\n",
|
||||
" for band_name in ['ndbi', 'ndwi', 'evi']:\n",
|
||||
" if band_name in data.data_vars:\n",
|
||||
" band_ts = data[band_name]\n",
|
||||
" data[f'{band_name}_mean'] = band_ts.mean(dim='time')\n",
|
||||
" temporal_features_added += 1\n",
|
||||
" \n",
|
||||
" print(f\"✅ Added {temporal_features_added} temporal/aggregate features\")\n",
|
||||
" \n",
|
||||
" # ===== SAVE TO CACHE =====\n",
|
||||
" print(f\"\\n[CACHE] Saving dataset to cache...\")\n",
|
||||
" try:\n",
|
||||
" data.to_netcdf(cache_file, engine='netcdf4')\n",
|
||||
" cache_size = os.path.getsize(cache_file) / (1024**3)\n",
|
||||
" print(f\"✅ Dataset saved to cache: {cache_file}\")\n",
|
||||
" print(f\" Cache size: {cache_size:.2f} GB\")\n",
|
||||
" except Exception as e:\n",
|
||||
" print(f\"⚠️ Error saving cache: {e}\")\n",
|
||||
" \n",
|
||||
" print(f\"\\n✅ OPTIMAL Dataset with native resolution + temporal features created!\")\n",
|
||||
" print(f\" {'='*70}\")\n",
|
||||
" print(f\" 🎬 Total scenes (time steps): {len(all_data_dict)}\")\n",
|
||||
" print(f\" 📊 Total bands/variables: {len(data.data_vars)}\")\n",
|
||||
" print(f\" 🖼️ Spatial size: {x_size} × {y_size} pixels (NATIVE resolution)\")\n",
|
||||
" print(f\" 📏 Native resolution: 10m (Sentinel-2 L2A)\")\n",
|
||||
" print(f\" ⏰ Temporal range: {scene_dates[0].date()} to {scene_dates[-1].date()}\")\n",
|
||||
" print(f\" 💾 Total dataset size: {notebook_utils.xarray_object_size(data)}\")\n",
|
||||
" print(f\" 💿 Cached at: {cache_file}\")\n",
|
||||
" print(f\" {'='*70}\")\n",
|
||||
" \n",
|
||||
" print(f\"\\n Dataset dimensions:\")\n",
|
||||
" for dim, size in data.dims.items():\n",
|
||||
" print(f\" {dim}: {size}\")\n",
|
||||
" \n",
|
||||
" print(f\"\\n Variables ({len(data.data_vars)}):\")\n",
|
||||
" spatial_vars = []\n",
|
||||
" temporal_vars = []\n",
|
||||
" for var_name in sorted(data.data_vars):\n",
|
||||
" if len(data[var_name].shape) == 3:\n",
|
||||
" spatial_vars.append(f\"{var_name} {data[var_name].shape}\")\n",
|
||||
" else:\n",
|
||||
" temporal_vars.append(f\"{var_name} {data[var_name].shape}\")\n",
|
||||
" \n",
|
||||
" print(f\" Spatial time-series ({len(spatial_vars)}):\")\n",
|
||||
" for v in spatial_vars:\n",
|
||||
" print(f\" - {v}\")\n",
|
||||
" print(f\" Temporal aggregates ({len(temporal_vars)}):\")\n",
|
||||
" for v in temporal_vars:\n",
|
||||
" print(f\" - {v}\")\n",
|
||||
" \n",
|
||||
" print(f\" {'='*70}\")\n",
|
||||
" \n",
|
||||
" display(data)\n",
|
||||
" \n",
|
||||
" # ===== EXTRACT NDVI FOR TRAINING =====\n",
|
||||
" print(f\"\\n[NDVI EXTRACTION] Extracting NDVI for model training...\")\n",
|
||||
" if 'ndvi_mean' in data.data_vars:\n",
|
||||
" # Use mean NDVI across time\n",
|
||||
" ndvi = data['ndvi_mean']\n",
|
||||
" print(f\"✅ NDVI extracted (mean across time)\")\n",
|
||||
" print(f\" Shape: {ndvi.shape}\")\n",
|
||||
" elif 'ndvi' in data.data_vars:\n",
|
||||
" # Use first time step if mean not available\n",
|
||||
" ndvi = data['ndvi'].isel(time=0)\n",
|
||||
" print(f\"✅ NDVI extracted (first time step)\")\n",
|
||||
" print(f\" Shape: {ndvi.shape}\")\n",
|
||||
" else:\n",
|
||||
" print(f\"❌ NDVI not found in dataset\")\n",
|
||||
" ndvi = None\n",
|
||||
" \n",
|
||||
"except Exception as e:\n",
|
||||
" print(f\"❌ Error: {e}\")\n",
|
||||
" import traceback\n",
|
||||
" traceback.print_exc()\n",
|
||||
" data = None\n",
|
||||
" ndvi = None\n",
|
||||
"\n",
|
||||
"print(\"=\"*70)"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 6,
|
||||
"id": "d2585562-88aa-4c7d-bf70-1f6affcf65d4",
|
||||
"metadata": {
|
||||
"tags": []
|
||||
},
|
||||
"outputs": [
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"======================================================================\n",
|
||||
"TRAINING DATA SETUP\n",
|
||||
"======================================================================\n",
|
||||
"\n",
|
||||
"[1] Loading training data: train/ST_training data_updated_1130points_new.shp\n",
|
||||
" ❌ Error: name 'load_train_data' is not defined\n",
|
||||
"\n",
|
||||
"[2] Label mapping:\n",
|
||||
" 0: Lua tom\n",
|
||||
" 1: Lua\n",
|
||||
" 2: CHN\n",
|
||||
" 3: CLN\n",
|
||||
" 4: TS\n",
|
||||
" 5: Song\n",
|
||||
" 6: Dat xay dung\n",
|
||||
" 7: Rung\n",
|
||||
"\n",
|
||||
"======================================================================\n"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"# 🎯 LOAD TRAINING DATA & EXTRACT FEATURES\n",
|
||||
"print(\"=\"*70)\n",
|
||||
"print(\"TRAINING DATA SETUP\")\n",
|
||||
"print(\"=\"*70)\n",
|
||||
"\n",
|
||||
"# Load training points\n",
|
||||
"train_path = \"train/ST_training data_updated_1130points_new.shp\"\n",
|
||||
"print(f\"\\n[1] Loading training data: {train_path}\")\n",
|
||||
"\n",
|
||||
"try:\n",
|
||||
" train = load_train_data(train_path)\n",
|
||||
" print(f\" ✅ Loaded {len(train)} training points\")\n",
|
||||
" print(f\" Columns: {list(train.columns)}\")\n",
|
||||
" train.head()\n",
|
||||
"except Exception as e:\n",
|
||||
" print(f\" ❌ Error: {e}\")\n",
|
||||
" train = None\n",
|
||||
"\n",
|
||||
"# Label mapping\n",
|
||||
"label_mapping = {\n",
|
||||
" \"Lua tom\": \"0\",\n",
|
||||
" \"Lua\": \"1\",\n",
|
||||
" \"CHN\": \"2\",\n",
|
||||
" \"CLN\": \"3\",\n",
|
||||
" \"TS\": \"4\",\n",
|
||||
" \"Song\": \"5\",\n",
|
||||
" \"Dat xay dung\": \"6\",\n",
|
||||
" \"Rung\": \"7\",\n",
|
||||
"}\n",
|
||||
"\n",
|
||||
"print(f\"\\n[2] Label mapping:\")\n",
|
||||
"for label, code in label_mapping.items():\n",
|
||||
" print(f\" {code}: {label}\")\n",
|
||||
"\n",
|
||||
"print(\"\\n\" + \"=\"*70)"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 7,
|
||||
"id": "2e955884-d4af-422d-a8e6-d436199540e0",
|
||||
"metadata": {
|
||||
"tags": []
|
||||
},
|
||||
"outputs": [
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"======================================================================\n",
|
||||
"MODEL TRAINING\n",
|
||||
"======================================================================\n",
|
||||
"❌ Missing training data or NDVI\n",
|
||||
"======================================================================\n",
|
||||
"CPU times: user 700 μs, sys: 0 ns, total: 700 μs\n",
|
||||
"Wall time: 638 μs\n"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"%%time\n",
|
||||
"# 🤖 RANDOM FOREST MODEL TRAINING\n",
|
||||
"print(\"=\"*70)\n",
|
||||
"print(\"MODEL TRAINING\")\n",
|
||||
"print(\"=\"*70)\n",
|
||||
"\n",
|
||||
"if train is not None and ndvi is not None:\n",
|
||||
" print(\"\\n[1] Extracting features from NDVI...\")\n",
|
||||
" try:\n",
|
||||
" # Extract NDVI values at training point locations\n",
|
||||
" X = []\n",
|
||||
" y = []\n",
|
||||
" \n",
|
||||
" for idx, point in train.iterrows():\n",
|
||||
" try:\n",
|
||||
" # Get NDVI value at point location (nearest neighbor)\n",
|
||||
" ndvi_val = float(ndvi.sel(x=point.geometry.x, y=point.geometry.y, method='nearest').values)\n",
|
||||
" label = label_mapping[point.Hientrang]\n",
|
||||
" \n",
|
||||
" X.append([ndvi_val])\n",
|
||||
" y.append(int(label))\n",
|
||||
" except Exception as e:\n",
|
||||
" print(f\" ⚠️ Point {idx}: {e}\")\n",
|
||||
" \n",
|
||||
" if len(X) > 0:\n",
|
||||
" X = np.array(X)\n",
|
||||
" y = np.array(y)\n",
|
||||
" print(f\" ✅ Extracted {len(X)} samples\")\n",
|
||||
" \n",
|
||||
" # Split data\n",
|
||||
" print(f\"\\n[2] Splitting data (80-20)...\")\n",
|
||||
" from sklearn.model_selection import train_test_split\n",
|
||||
" X_train, X_test, y_train, y_test = train_test_split(\n",
|
||||
" X, y, test_size=0.2, random_state=42\n",
|
||||
" )\n",
|
||||
" print(f\" Train: {len(X_train)}, Test: {len(X_test)}\")\n",
|
||||
" \n",
|
||||
" # Train model\n",
|
||||
" print(f\"\\n[3] Training Random Forest...\")\n",
|
||||
" from sklearn.ensemble import RandomForestClassifier\n",
|
||||
" from sklearn.metrics import accuracy_score\n",
|
||||
" \n",
|
||||
" model = RandomForestClassifier(n_estimators=100, random_state=42, n_jobs=-1)\n",
|
||||
" model.fit(X_train, y_train)\n",
|
||||
" \n",
|
||||
" # Evaluate\n",
|
||||
" y_pred = model.predict(X_test)\n",
|
||||
" accuracy = accuracy_score(y_test, y_pred)\n",
|
||||
" print(f\" ✅ Model trained!\")\n",
|
||||
" print(f\" Accuracy: {accuracy*100:.2f}%\")\n",
|
||||
" \n",
|
||||
" else:\n",
|
||||
" print(f\" ❌ No samples extracted\")\n",
|
||||
" model = None\n",
|
||||
" \n",
|
||||
" except Exception as e:\n",
|
||||
" print(f\" ❌ Error: {e}\")\n",
|
||||
" import traceback\n",
|
||||
" traceback.print_exc()\n",
|
||||
" model = None\n",
|
||||
"else:\n",
|
||||
" print(\"❌ Missing training data or NDVI\")\n",
|
||||
" model = None\n",
|
||||
"\n",
|
||||
"print(\"=\"*70)"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 8,
|
||||
"id": "f1a14379-ed6e-4897-9ca4-2669743fab40",
|
||||
"metadata": {
|
||||
"tags": []
|
||||
},
|
||||
"outputs": [
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"======================================================================\n",
|
||||
"MODEL SAVING\n",
|
||||
"======================================================================\n",
|
||||
"❌ No model to save\n",
|
||||
"======================================================================\n"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"# 💾 SAVE MODEL\n",
|
||||
"print(\"=\"*70)\n",
|
||||
"print(\"MODEL SAVING\")\n",
|
||||
"print(\"=\"*70)\n",
|
||||
"\n",
|
||||
"if model is not None:\n",
|
||||
" print(\"\\n🔄 Saving trained model...\")\n",
|
||||
" try:\n",
|
||||
" save_model(\"model_rasterio.joblib\", model)\n",
|
||||
" print(\"✅ Model saved to model_train/model_rasterio.joblib\")\n",
|
||||
" except Exception as e:\n",
|
||||
" print(f\"❌ Error saving model: {e}\")\n",
|
||||
"else:\n",
|
||||
" print(\"❌ No model to save\")\n",
|
||||
"\n",
|
||||
"print(\"=\"*70)"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": null,
|
||||
"id": "33dd516d-9824-499e-96b9-5cd9224c194c",
|
||||
"metadata": {
|
||||
"tags": []
|
||||
},
|
||||
"outputs": [
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"======================================================================\n",
|
||||
"CLEANUP\n",
|
||||
"======================================================================\n",
|
||||
"\n",
|
||||
"🔄 Closing Dask client and cluster...\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"✅ Cleanup complete\n",
|
||||
"\n",
|
||||
"======================================================================\n",
|
||||
"✅ PIPELINE COMPLETE\n",
|
||||
"======================================================================\n"
|
||||
]
|
||||
},
|
||||
{
|
||||
"ename": "",
|
||||
"evalue": "",
|
||||
"output_type": "error",
|
||||
"traceback": [
|
||||
"\u001b[1;31mThe Kernel crashed while executing code in the current cell or a previous cell. \n",
|
||||
"\u001b[1;31mPlease review the code in the cell(s) to identify a possible cause of the failure. \n",
|
||||
"\u001b[1;31mClick <a href='https://aka.ms/vscodeJupyterKernelCrash'>here</a> for more info. \n",
|
||||
"\u001b[1;31mView Jupyter <a href='command:jupyter.viewOutput'>log</a> for further details."
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"# 🛑 CLEANUP\n",
|
||||
"print(\"=\"*70)\n",
|
||||
"print(\"CLEANUP\")\n",
|
||||
"print(\"=\"*70)\n",
|
||||
"\n",
|
||||
"print(\"\\n🔄 Closing Dask client and cluster...\")\n",
|
||||
"try:\n",
|
||||
" client.close()\n",
|
||||
" cluster.close()\n",
|
||||
" print(\"✅ Cleanup complete\")\n",
|
||||
"except Exception as e:\n",
|
||||
" print(f\"⚠️ Error during cleanup: {e}\")\n",
|
||||
"\n",
|
||||
"print(\"\\n\" + \"=\"*70)\n",
|
||||
"print(\"✅ PIPELINE COMPLETE\")\n",
|
||||
"print(\"=\"*70)"
|
||||
]
|
||||
}
|
||||
],
|
||||
"metadata": {
|
||||
"kernelspec": {
|
||||
"display_name": "env_01",
|
||||
"language": "python",
|
||||
"name": "python3"
|
||||
},
|
||||
"language_info": {
|
||||
"codemirror_mode": {
|
||||
"name": "ipython",
|
||||
"version": 3
|
||||
},
|
||||
"file_extension": ".py",
|
||||
"mimetype": "text/x-python",
|
||||
"name": "python",
|
||||
"nbconvert_exporter": "python",
|
||||
"pygments_lexer": "ipython3",
|
||||
"version": "3.10.18"
|
||||
}
|
||||
},
|
||||
"nbformat": 4,
|
||||
"nbformat_minor": 5
|
||||
}
|
||||
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File diff suppressed because one or more lines are too long
Some files were not shown because too many files have changed in this diff Show More
Reference in New Issue
Block a user