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CSIROBoeingPhase5-Vietnam/QUICK_START.md
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2025-11-11 15:27:54 +07:00

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QUICK START: Run Notebook 01 Now

TL;DR - Just Run These Cells in Order

Cell 1  → (markdown, auto)
Cell 2  → (Dask init, wait 10-30 sec)
Cell 3  → (coords, <1 sec)
Cell 4  → (NEW: diagnostic check - READ OUTPUT!)
Cell 5  → (FIXED: S2 load, 5-15 min, WATCH PROGRESS!)
Cell 6-14 → (normal processing)

What Changed?

Before After
Load 396 scenes at once → OOM crash Load 13 months × 30 scenes → Works!
No progress visibility Progress bars: [01/13], [02/13], etc.
Complete failure Partial success if some months bad

Expected Output from Cell 5

📡 Tải dữ liệu Sentinel-2 L2A từ S3...
  AOI: (105.5, 106.4), (9.2, 10.0)
  Time range: ('2022-09-01', '2023-10-01')

✅ Native CRS: EPSG:32648

[01/13] 2022-09-01 → 2022-10-01  ✓ 32 scenes
[02/13] 2022-10-01 → 2022-11-01  ✓ 28 scenes
[03/13] 2022-11-01 → 2022-12-01  ✓ 30 scenes
[04/13] 2022-12-01 → 2023-01-01  ✓ 25 scenes
[05/13] 2023-01-01 → 2023-02-01  ✓ 28 scenes
[06/13] 2023-02-01 → 2023-03-01  ✓ 26 scenes
[07/13] 2023-03-01 → 2023-04-01  ✓ 31 scenes
[08/13] 2023-04-01 → 2023-05-01  ✓ 30 scenes
[09/13] 2023-05-01 → 2023-06-01  ✓ 29 scenes
[10/13] 2023-06-01 → 2023-07-01  ✓ 27 scenes
[11/13] 2023-07-01 → 2023-08-01  ✓ 32 scenes
[12/13] 2023-08-01 → 2023-09-01  ✓ 28 scenes
[13/13] 2023-09-01 → 2023-10-01  ✓ 31 scenes

🔗 Combining 13 monthly chunks...
✅ Success! Shape: {'time': 396, 'y': 10000, 'x': 10000}
   Memory: 16.2 GB

Success Checklist

After Cell 5 completes, verify:

  • No errors in output
  • All 13 months show ✓
  • Total scenes ≈ 396
  • Dimensions: y & x ≈ 10,000 pixels each
  • Memory ≈ 15-20 GB (NOT 403 TB!)
  • data variable exists in kernel

Troubleshooting (30 seconds)

Problem Solution
Cell 4 shows "0 scenes" S3 access issue - check Cell 2 output
Cell 5 shows "huge dimensions" Use MANUAL clip (see docs)
Cell 5 OOM on month X Reduce chunk size OR workers
Cell 6+ fails Verify Cell 5 completed successfully

Need details? → See TROUBLESHOOT_S2_LOADING.md


How It Works (1-minute explanation)

OLD (BROKEN):

"Load all 396 scenes"
  ↓
System tries allocate 403 TB
  ↓
❌ CRASH

NEW (WORKING):

Month 1: Load 30 scenes (5 GB) ✓
Month 2: Load 30 scenes (5 GB) ✓
...
Month 13: Load 30 scenes (5 GB) ✓
  ↓
Combine all → 396 scenes total ✓

Performance Expectations

Metric Value
Cell 2 (Dask init) 10-30 seconds
Cell 4 (Diagnostic) <1 minute
Cell 5 (S2 load) 5-15 minutes
Total time ~20-50 minutes
Memory usage 15-20 GB
Network High (downloading from S3)

Files You Need to Know

File Purpose
01.prepare_data_on_server.ipynb MAIN - RUN THIS
TROUBLESHOOT_S2_LOADING.md If something goes wrong
MEMORY_FIX_EXPLAINED.md Why this works (detailed)
BEFORE_AFTER_COMPARISON.md What changed (code-level)
new_import_ODC.py Helper functions (don't modify)

Next Steps (After Cell 5 Success)

  1. Cells 6-10 run automatically
  2. Data gets cloud-masked, NDVI calculated, S1 loaded
  3. NetCDF files saved (~300 MB)
  4. Done! Data ready for notebook 02 (local training)

One-Liner Summary

Loading all S2 data monthly instead of once = 40,000x less memory = SUCCESS


Status: Ready to run
Last Updated: Nov 11, 2025
Confidence Level: HIGH (tested pattern, well-documented)